Protein–RNA interactions for Protein: P01849

Tcra, T-cell receptor alpha chain C region, mousemouse

Predictions only

Length 138 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TcraP01849 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
TcraP01849 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC9.73□□□□□ -0.85
TcraP01849 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
TcraP01849 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
TcraP01849 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
TcraP01849 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC9.73□□□□□ -0.85
TcraP01849 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
TcraP01849 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
TcraP01849 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
TcraP01849 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
TcraP01849 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC9.73□□□□□ -0.85
TcraP01849 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC9.73□□□□□ -0.85
TcraP01849 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC9.73□□□□□ -0.85
TcraP01849 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC9.73□□□□□ -0.85
TcraP01849 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
TcraP01849 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
TcraP01849 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
TcraP01849 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
TcraP01849 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
TcraP01849 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
TcraP01849 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC9.72□□□□□ -0.85
TcraP01849 Cdc37-201ENSMUST00000019615 7851 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
TcraP01849 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
TcraP01849 Sh3tc1-201ENSMUST00000070203 4549 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
TcraP01849 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
TcraP01849 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
TcraP01849 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
TcraP01849 Syt7-205ENSMUST00000224135 1557 ntBASIC9.72□□□□□ -0.85
TcraP01849 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC9.72□□□□□ -0.85
TcraP01849 Xpot-203ENSMUST00000218004 6005 ntAPPRIS P1 TSL 5 BASIC9.72□□□□□ -0.85
TcraP01849 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC9.72□□□□□ -0.85
TcraP01849 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC9.72□□□□□ -0.85
TcraP01849 Gcn1l1-201ENSMUST00000064454 8555 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
TcraP01849 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
TcraP01849 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC9.72□□□□□ -0.85
TcraP01849 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC9.72□□□□□ -0.85
TcraP01849 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
TcraP01849 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC9.72□□□□□ -0.85
TcraP01849 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
TcraP01849 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC9.72□□□□□ -0.85
TcraP01849 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC9.72□□□□□ -0.85
TcraP01849 Gm12882-201ENSMUST00000121696 517 ntBASIC9.72□□□□□ -0.85
TcraP01849 Gm12260-201ENSMUST00000122447 411 ntBASIC9.72□□□□□ -0.85
TcraP01849 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC9.72□□□□□ -0.85
TcraP01849 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
TcraP01849 Gm17271-201ENSMUST00000165535 355 ntBASIC9.72□□□□□ -0.85
TcraP01849 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC9.72□□□□□ -0.85
TcraP01849 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
TcraP01849 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC9.72□□□□□ -0.85
TcraP01849 AC154572.2-201ENSMUST00000225105 997 ntBASIC9.72□□□□□ -0.85
TcraP01849 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC9.72□□□□□ -0.85
TcraP01849 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC9.72□□□□□ -0.85
TcraP01849 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
TcraP01849 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC9.72□□□□□ -0.85
TcraP01849 Sgk1-213ENSMUST00000164659 2602 ntTSL 5 BASIC9.72□□□□□ -0.85
TcraP01849 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
TcraP01849 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
TcraP01849 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
TcraP01849 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
TcraP01849 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
TcraP01849 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
TcraP01849 Klhl3-202ENSMUST00000160860 7149 ntAPPRIS P1 TSL 5 BASIC9.72□□□□□ -0.85
TcraP01849 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
TcraP01849 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
TcraP01849 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC9.71□□□□□ -0.85
TcraP01849 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
TcraP01849 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
TcraP01849 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
TcraP01849 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC9.71□□□□□ -0.85
TcraP01849 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
TcraP01849 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
TcraP01849 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
TcraP01849 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC9.71□□□□□ -0.85
TcraP01849 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
TcraP01849 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC9.71□□□□□ -0.86
TcraP01849 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
TcraP01849 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC9.71□□□□□ -0.86
TcraP01849 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC9.71□□□□□ -0.86
TcraP01849 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
TcraP01849 Gm7229-201ENSMUST00000214719 1007 ntBASIC9.71□□□□□ -0.86
TcraP01849 Gm5364-201ENSMUST00000216789 889 ntBASIC9.71□□□□□ -0.86
TcraP01849 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
TcraP01849 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
TcraP01849 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
TcraP01849 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC9.71□□□□□ -0.86
TcraP01849 Asb13-201ENSMUST00000042288 4453 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
TcraP01849 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
TcraP01849 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
TcraP01849 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC9.71□□□□□ -0.86
TcraP01849 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
TcraP01849 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC9.71□□□□□ -0.86
TcraP01849 Gm4782-201ENSMUST00000168705 2046 ntBASIC9.71□□□□□ -0.86
TcraP01849 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
TcraP01849 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC9.71□□□□□ -0.86
TcraP01849 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC9.71□□□□□ -0.86
TcraP01849 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
TcraP01849 Gm35040-201ENSMUST00000206829 5094 ntTSL 2 BASIC9.71□□□□□ -0.86
TcraP01849 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
TcraP01849 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
TcraP01849 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Retrieved 100 of 76,532 protein–RNA pairs in 64.3 ms