Protein–RNA interactions for Protein: O88879

Apaf1, Apoptotic protease-activating factor 1, mousemouse

Predictions only

Length 1,249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Apaf1O88879 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Apaf1O88879 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Apaf1O88879 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Apaf1O88879 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Apaf1O88879 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC17.3■□□□□ 0.36
Apaf1O88879 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC17.3■□□□□ 0.36
Apaf1O88879 Gm11618-201ENSMUST00000117946 267 ntBASIC17.3■□□□□ 0.36
Apaf1O88879 Gm14660-201ENSMUST00000119809 575 ntBASIC17.3■□□□□ 0.36
Apaf1O88879 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Apaf1O88879 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Apaf1O88879 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC17.3■□□□□ 0.36
Apaf1O88879 Gm27731-201ENSMUST00000185192 107 ntBASIC17.3■□□□□ 0.36
Apaf1O88879 Gm18062-201ENSMUST00000208020 547 ntBASIC17.3■□□□□ 0.36
Apaf1O88879 Gm18055-201ENSMUST00000208254 547 ntBASIC17.3■□□□□ 0.36
Apaf1O88879 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Apaf1O88879 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Apaf1O88879 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Apaf1O88879 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Apaf1O88879 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Apaf1O88879 AC131068.2-201ENSMUST00000226175 1453 ntBASIC17.3■□□□□ 0.36
Apaf1O88879 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC17.3■□□□□ 0.36
Apaf1O88879 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Apaf1O88879 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Apaf1O88879 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Apaf1O88879 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Apaf1O88879 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC17.29■□□□□ 0.36
Apaf1O88879 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Apaf1O88879 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Apaf1O88879 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Apaf1O88879 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Apaf1O88879 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Apaf1O88879 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Apaf1O88879 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Apaf1O88879 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Apaf1O88879 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Apaf1O88879 Gm16202-201ENSMUST00000117532 544 ntBASIC17.29■□□□□ 0.36
Apaf1O88879 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC17.29■□□□□ 0.36
Apaf1O88879 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC17.29■□□□□ 0.36
Apaf1O88879 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC17.29■□□□□ 0.36
Apaf1O88879 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC17.29■□□□□ 0.36
Apaf1O88879 Gm40466-201ENSMUST00000212174 422 ntBASIC17.29■□□□□ 0.36
Apaf1O88879 AC122305.4-201ENSMUST00000216159 1206 ntBASIC17.29■□□□□ 0.36
Apaf1O88879 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC17.29■□□□□ 0.36
Apaf1O88879 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Apaf1O88879 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Apaf1O88879 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Apaf1O88879 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Apaf1O88879 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Apaf1O88879 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Apaf1O88879 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Apaf1O88879 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Apaf1O88879 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Apaf1O88879 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Apaf1O88879 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC17.28■□□□□ 0.36
Apaf1O88879 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Apaf1O88879 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Apaf1O88879 AC122314.1-201ENSMUST00000223056 2239 ntBASIC17.28■□□□□ 0.36
Apaf1O88879 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Apaf1O88879 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Apaf1O88879 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Apaf1O88879 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Apaf1O88879 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC17.28■□□□□ 0.36
Apaf1O88879 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Apaf1O88879 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC17.28■□□□□ 0.36
Apaf1O88879 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Apaf1O88879 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC17.28■□□□□ 0.36
Apaf1O88879 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC17.28■□□□□ 0.36
Apaf1O88879 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Apaf1O88879 Gm37922-201ENSMUST00000195596 455 ntBASIC17.28■□□□□ 0.36
Apaf1O88879 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Apaf1O88879 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Apaf1O88879 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Apaf1O88879 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Apaf1O88879 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC17.28■□□□□ 0.36
Apaf1O88879 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC17.28■□□□□ 0.36
Apaf1O88879 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Apaf1O88879 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
Apaf1O88879 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC17.28■□□□□ 0.36
Apaf1O88879 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Apaf1O88879 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Apaf1O88879 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Apaf1O88879 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Apaf1O88879 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Apaf1O88879 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC17.27■□□□□ 0.36
Apaf1O88879 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Apaf1O88879 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Apaf1O88879 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Apaf1O88879 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC17.27■□□□□ 0.36
Apaf1O88879 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Apaf1O88879 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC17.27■□□□□ 0.36
Apaf1O88879 Gm11978-201ENSMUST00000122315 466 ntBASIC17.27■□□□□ 0.36
Apaf1O88879 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Apaf1O88879 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Apaf1O88879 Gm4271-201ENSMUST00000174444 973 ntBASIC17.27■□□□□ 0.36
Apaf1O88879 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Apaf1O88879 Gm10146-201ENSMUST00000072739 309 ntBASIC17.27■□□□□ 0.36
Apaf1O88879 Gm16372-201ENSMUST00000073088 450 ntBASIC17.27■□□□□ 0.36
Apaf1O88879 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Apaf1O88879 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Apaf1O88879 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms