Protein–RNA interactions for Protein: O88544

Cops4, COP9 signalosome complex subunit 4, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops4O88544 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cops4O88544 Mir125a-201ENSMUST00000083545 68 ntBASIC12.3□□□□□ -0.44
Cops4O88544 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cops4O88544 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Cops4O88544 Gm7049-201ENSMUST00000223520 1712 ntBASIC12.3□□□□□ -0.44
Cops4O88544 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cops4O88544 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC12.3□□□□□ -0.44
Cops4O88544 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cops4O88544 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cops4O88544 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cops4O88544 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cops4O88544 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cops4O88544 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC12.3□□□□□ -0.44
Cops4O88544 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cops4O88544 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cops4O88544 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC12.3□□□□□ -0.44
Cops4O88544 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Cops4O88544 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Cops4O88544 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Cops4O88544 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cops4O88544 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cops4O88544 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cops4O88544 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
Cops4O88544 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cops4O88544 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC12.29□□□□□ -0.44
Cops4O88544 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC12.29□□□□□ -0.44
Cops4O88544 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cops4O88544 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Cops4O88544 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Cops4O88544 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cops4O88544 Paupar-201ENSMUST00000194826 3482 ntBASIC12.29□□□□□ -0.44
Cops4O88544 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Cops4O88544 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Cops4O88544 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Cops4O88544 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cops4O88544 Mir698-201ENSMUST00000102164 109 ntBASIC12.29□□□□□ -0.44
Cops4O88544 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Cops4O88544 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Cops4O88544 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Cops4O88544 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC12.29□□□□□ -0.44
Cops4O88544 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Cops4O88544 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC12.29□□□□□ -0.44
Cops4O88544 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC12.29□□□□□ -0.44
Cops4O88544 Gm24158-201ENSMUST00000175263 71 ntBASIC12.29□□□□□ -0.44
Cops4O88544 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC12.29□□□□□ -0.44
Cops4O88544 Gm43073-201ENSMUST00000198200 1189 ntBASIC12.29□□□□□ -0.44
Cops4O88544 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Cops4O88544 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cops4O88544 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cops4O88544 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cops4O88544 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cops4O88544 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cops4O88544 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cops4O88544 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Cops4O88544 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cops4O88544 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cops4O88544 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Cops4O88544 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cops4O88544 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Cops4O88544 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cops4O88544 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cops4O88544 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cops4O88544 Gm44401-201ENSMUST00000204462 2375 ntBASIC12.29□□□□□ -0.44
Cops4O88544 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Cops4O88544 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cops4O88544 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cops4O88544 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
Cops4O88544 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cops4O88544 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Cops4O88544 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Cops4O88544 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Cops4O88544 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC12.29□□□□□ -0.44
Cops4O88544 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Cops4O88544 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC12.29□□□□□ -0.44
Cops4O88544 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cops4O88544 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cops4O88544 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cops4O88544 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cops4O88544 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC12.28□□□□□ -0.44
Cops4O88544 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cops4O88544 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Cops4O88544 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cops4O88544 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cops4O88544 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cops4O88544 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cops4O88544 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cops4O88544 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Cops4O88544 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cops4O88544 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Cops4O88544 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cops4O88544 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cops4O88544 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC12.28□□□□□ -0.44
Cops4O88544 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC12.28□□□□□ -0.44
Cops4O88544 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cops4O88544 Gm15678-201ENSMUST00000117573 960 ntBASIC12.28□□□□□ -0.44
Cops4O88544 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC12.28□□□□□ -0.44
Cops4O88544 Gm27631-201ENSMUST00000184163 466 ntBASIC12.28□□□□□ -0.44
Cops4O88544 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC12.28□□□□□ -0.44
Cops4O88544 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Cops4O88544 Gm43474-201ENSMUST00000196415 774 ntBASIC12.28□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 41 ms