Protein–RNA interactions for Protein: O70400

Pdlim1, PDZ and LIM domain protein 1, mousemouse

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim1O70400 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pdlim1O70400 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pdlim1O70400 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Pdlim1O70400 Gm42706-201ENSMUST00000199733 1910 ntBASIC13.18□□□□□ -0.3
Pdlim1O70400 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Pdlim1O70400 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Pdlim1O70400 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pdlim1O70400 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Pdlim1O70400 Gm11424-201ENSMUST00000121929 829 ntBASIC13.18□□□□□ -0.3
Pdlim1O70400 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC13.18□□□□□ -0.3
Pdlim1O70400 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pdlim1O70400 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC13.18□□□□□ -0.3
Pdlim1O70400 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC13.18□□□□□ -0.3
Pdlim1O70400 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC13.18□□□□□ -0.3
Pdlim1O70400 Gm16372-201ENSMUST00000073088 450 ntBASIC13.18□□□□□ -0.3
Pdlim1O70400 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pdlim1O70400 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Pdlim1O70400 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pdlim1O70400 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
Pdlim1O70400 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pdlim1O70400 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC13.18□□□□□ -0.3
Pdlim1O70400 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC13.18□□□□□ -0.3
Pdlim1O70400 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Pdlim1O70400 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Pdlim1O70400 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pdlim1O70400 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pdlim1O70400 Gm15544-201ENSMUST00000118776 1531 ntBASIC13.18□□□□□ -0.3
Pdlim1O70400 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pdlim1O70400 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pdlim1O70400 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC13.17□□□□□ -0.3
Pdlim1O70400 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pdlim1O70400 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pdlim1O70400 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pdlim1O70400 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pdlim1O70400 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Pdlim1O70400 Matn2-206ENSMUST00000228570 2798 ntBASIC13.17□□□□□ -0.3
Pdlim1O70400 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pdlim1O70400 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Pdlim1O70400 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pdlim1O70400 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pdlim1O70400 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pdlim1O70400 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Pdlim1O70400 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC13.17□□□□□ -0.3
Pdlim1O70400 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pdlim1O70400 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pdlim1O70400 Gm6161-201ENSMUST00000121942 1102 ntBASIC13.17□□□□□ -0.3
Pdlim1O70400 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Pdlim1O70400 Gm6254-201ENSMUST00000168178 1072 ntBASIC13.17□□□□□ -0.3
Pdlim1O70400 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pdlim1O70400 Gm6153-201ENSMUST00000172004 1058 ntBASIC13.17□□□□□ -0.3
Pdlim1O70400 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Pdlim1O70400 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Pdlim1O70400 Gm5641-202ENSMUST00000198699 1080 ntBASIC13.17□□□□□ -0.3
Pdlim1O70400 Olfr1428-203ENSMUST00000214103 2127 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Pdlim1O70400 CT573086.1-201ENSMUST00000227202 1074 ntBASIC13.17□□□□□ -0.3
Pdlim1O70400 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Pdlim1O70400 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pdlim1O70400 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Pdlim1O70400 Gm28386-201ENSMUST00000189147 1849 ntBASIC13.17□□□□□ -0.3
Pdlim1O70400 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Pdlim1O70400 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Pdlim1O70400 Rbm8a-202ENSMUST00000196456 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pdlim1O70400 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pdlim1O70400 Gm18630-201ENSMUST00000222109 1397 ntBASIC13.17□□□□□ -0.3
Pdlim1O70400 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pdlim1O70400 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pdlim1O70400 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
Pdlim1O70400 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pdlim1O70400 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pdlim1O70400 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pdlim1O70400 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pdlim1O70400 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
Pdlim1O70400 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pdlim1O70400 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Pdlim1O70400 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pdlim1O70400 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pdlim1O70400 Gm45053-201ENSMUST00000206112 2499 ntBASIC13.16□□□□□ -0.3
Pdlim1O70400 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pdlim1O70400 Gm9816-201ENSMUST00000122292 1414 ntBASIC13.16□□□□□ -0.3
Pdlim1O70400 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Pdlim1O70400 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pdlim1O70400 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Pdlim1O70400 Gm11814-201ENSMUST00000119515 929 ntBASIC13.16□□□□□ -0.3
Pdlim1O70400 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC13.16□□□□□ -0.3
Pdlim1O70400 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC13.16□□□□□ -0.3
Pdlim1O70400 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC13.16□□□□□ -0.3
Pdlim1O70400 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pdlim1O70400 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Pdlim1O70400 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Pdlim1O70400 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pdlim1O70400 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pdlim1O70400 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC13.16□□□□□ -0.3
Pdlim1O70400 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pdlim1O70400 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pdlim1O70400 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pdlim1O70400 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pdlim1O70400 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pdlim1O70400 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Pdlim1O70400 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
Pdlim1O70400 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms