Protein–RNA interactions for Protein: O55028

Bckdk, [3-methyl-2-oxobutanoate dehydrogenase [lipoamide]] kinase, mitochondrial, mousemouse

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BckdkO55028 AC149294.4-201ENSMUST00000227870 882 ntBASIC12.39□□□□□ -0.43
BckdkO55028 CT030704.2-201ENSMUST00000228887 494 ntBASIC12.39□□□□□ -0.43
BckdkO55028 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC12.39□□□□□ -0.43
BckdkO55028 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC12.39□□□□□ -0.43
BckdkO55028 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
BckdkO55028 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
BckdkO55028 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
BckdkO55028 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
BckdkO55028 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
BckdkO55028 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC12.39□□□□□ -0.43
BckdkO55028 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
BckdkO55028 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
BckdkO55028 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
BckdkO55028 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
BckdkO55028 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
BckdkO55028 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
BckdkO55028 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
BckdkO55028 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
BckdkO55028 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
BckdkO55028 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
BckdkO55028 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
BckdkO55028 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
BckdkO55028 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
BckdkO55028 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
BckdkO55028 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
BckdkO55028 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
BckdkO55028 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC12.38□□□□□ -0.43
BckdkO55028 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
BckdkO55028 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
BckdkO55028 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
BckdkO55028 Mir692-1-201ENSMUST00000102263 109 ntBASIC12.38□□□□□ -0.43
BckdkO55028 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC12.38□□□□□ -0.43
BckdkO55028 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
BckdkO55028 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC12.38□□□□□ -0.43
BckdkO55028 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
BckdkO55028 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
BckdkO55028 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC12.38□□□□□ -0.43
BckdkO55028 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC12.38□□□□□ -0.43
BckdkO55028 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
BckdkO55028 AC156560.2-201ENSMUST00000221232 264 ntBASIC12.38□□□□□ -0.43
BckdkO55028 CT030657.3-201ENSMUST00000222707 1200 ntBASIC12.38□□□□□ -0.43
BckdkO55028 Cdk7-205ENSMUST00000225990 1159 ntBASIC12.38□□□□□ -0.43
BckdkO55028 AC159006.1-201ENSMUST00000226396 258 ntBASIC12.38□□□□□ -0.43
BckdkO55028 AC150560.1-201ENSMUST00000227731 1187 ntBASIC12.38□□□□□ -0.43
BckdkO55028 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
BckdkO55028 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
BckdkO55028 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
BckdkO55028 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
BckdkO55028 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
BckdkO55028 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
BckdkO55028 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
BckdkO55028 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
BckdkO55028 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
BckdkO55028 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC12.38□□□□□ -0.43
BckdkO55028 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
BckdkO55028 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
BckdkO55028 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC12.38□□□□□ -0.43
BckdkO55028 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC12.37□□□□□ -0.43
BckdkO55028 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
BckdkO55028 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
BckdkO55028 Gm15222-202ENSMUST00000228667 1726 ntBASIC12.37□□□□□ -0.43
BckdkO55028 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
BckdkO55028 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
BckdkO55028 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
BckdkO55028 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
BckdkO55028 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC12.37□□□□□ -0.43
BckdkO55028 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
BckdkO55028 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC12.37□□□□□ -0.43
BckdkO55028 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
BckdkO55028 Gm11557-201ENSMUST00000120200 1008 ntBASIC12.37□□□□□ -0.43
BckdkO55028 Gm8927-201ENSMUST00000181978 981 ntBASIC12.37□□□□□ -0.43
BckdkO55028 Gm43438-201ENSMUST00000198133 379 ntBASIC12.37□□□□□ -0.43
BckdkO55028 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC12.37□□□□□ -0.43
BckdkO55028 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC12.37□□□□□ -0.43
BckdkO55028 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
BckdkO55028 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
BckdkO55028 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
BckdkO55028 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
BckdkO55028 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
BckdkO55028 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
BckdkO55028 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
BckdkO55028 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
BckdkO55028 Gm3222-201ENSMUST00000071282 990 ntBASIC12.37□□□□□ -0.43
BckdkO55028 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC12.37□□□□□ -0.43
BckdkO55028 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
BckdkO55028 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
BckdkO55028 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
BckdkO55028 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
BckdkO55028 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
BckdkO55028 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
BckdkO55028 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
BckdkO55028 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
BckdkO55028 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
BckdkO55028 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
BckdkO55028 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
BckdkO55028 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
BckdkO55028 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
BckdkO55028 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
BckdkO55028 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
BckdkO55028 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 49.6 ms