Protein–RNA interactions for Protein: O35393

Efnb3, Ephrin-B3, mousemouse

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Efnb3O35393 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Efnb3O35393 AC151895.1-201ENSMUST00000219025 1742 ntBASIC10.55□□□□□ -0.72
Efnb3O35393 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Efnb3O35393 Gm44401-201ENSMUST00000204462 2375 ntBASIC10.55□□□□□ -0.72
Efnb3O35393 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC10.55□□□□□ -0.72
Efnb3O35393 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Efnb3O35393 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Efnb3O35393 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Efnb3O35393 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Efnb3O35393 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Efnb3O35393 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Efnb3O35393 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Efnb3O35393 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Efnb3O35393 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
Efnb3O35393 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Efnb3O35393 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC10.55□□□□□ -0.72
Efnb3O35393 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Efnb3O35393 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Efnb3O35393 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC10.55□□□□□ -0.72
Efnb3O35393 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC10.55□□□□□ -0.72
Efnb3O35393 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Efnb3O35393 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Efnb3O35393 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Efnb3O35393 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC10.55□□□□□ -0.72
Efnb3O35393 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC10.55□□□□□ -0.72
Efnb3O35393 Gm6916-202ENSMUST00000205523 195 ntBASIC10.55□□□□□ -0.72
Efnb3O35393 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Efnb3O35393 AC140397.2-201ENSMUST00000224213 834 ntBASIC10.55□□□□□ -0.72
Efnb3O35393 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC10.55□□□□□ -0.72
Efnb3O35393 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC10.55□□□□□ -0.72
Efnb3O35393 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC10.55□□□□□ -0.72
Efnb3O35393 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Efnb3O35393 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Efnb3O35393 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Efnb3O35393 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Efnb3O35393 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Efnb3O35393 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Efnb3O35393 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Efnb3O35393 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC10.55□□□□□ -0.72
Efnb3O35393 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Efnb3O35393 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Efnb3O35393 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Efnb3O35393 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Efnb3O35393 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Efnb3O35393 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Efnb3O35393 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Efnb3O35393 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Efnb3O35393 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Efnb3O35393 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC10.54□□□□□ -0.72
Efnb3O35393 Gm45743-201ENSMUST00000212701 2795 ntBASIC10.54□□□□□ -0.72
Efnb3O35393 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Efnb3O35393 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC10.54□□□□□ -0.72
Efnb3O35393 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Efnb3O35393 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Efnb3O35393 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Efnb3O35393 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Efnb3O35393 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Efnb3O35393 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC10.54□□□□□ -0.72
Efnb3O35393 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
Efnb3O35393 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Efnb3O35393 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
Efnb3O35393 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Efnb3O35393 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Efnb3O35393 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Efnb3O35393 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC10.54□□□□□ -0.72
Efnb3O35393 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
Efnb3O35393 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC10.54□□□□□ -0.72
Efnb3O35393 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Efnb3O35393 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC10.54□□□□□ -0.72
Efnb3O35393 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Efnb3O35393 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Efnb3O35393 Gm13015-201ENSMUST00000118674 204 ntBASIC10.54□□□□□ -0.72
Efnb3O35393 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Efnb3O35393 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Efnb3O35393 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
Efnb3O35393 Gm24158-201ENSMUST00000175263 71 ntBASIC10.54□□□□□ -0.72
Efnb3O35393 Gm10253-201ENSMUST00000194270 940 ntBASIC10.54□□□□□ -0.72
Efnb3O35393 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Efnb3O35393 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC10.54□□□□□ -0.72
Efnb3O35393 AC121804.3-201ENSMUST00000223420 295 ntBASIC10.54□□□□□ -0.72
Efnb3O35393 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC10.54□□□□□ -0.72
Efnb3O35393 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Efnb3O35393 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Efnb3O35393 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Efnb3O35393 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Efnb3O35393 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Efnb3O35393 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
Efnb3O35393 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC10.54□□□□□ -0.72
Efnb3O35393 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Efnb3O35393 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Efnb3O35393 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Efnb3O35393 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Efnb3O35393 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Efnb3O35393 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Efnb3O35393 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Efnb3O35393 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Efnb3O35393 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Efnb3O35393 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Efnb3O35393 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Efnb3O35393 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 134.4 ms