Protein–RNA interactions for Protein: J3QK78

Gm3139, Predicted gene 3139, mousemouse

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3139J3QK78 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Gm3139J3QK78 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Gm3139J3QK78 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Gm3139J3QK78 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
Gm3139J3QK78 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Gm3139J3QK78 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC13.27□□□□□ -0.28
Gm3139J3QK78 AC154725.1-201ENSMUST00000224826 1961 ntBASIC13.27□□□□□ -0.28
Gm3139J3QK78 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Gm3139J3QK78 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC13.27□□□□□ -0.29
Gm3139J3QK78 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC13.27□□□□□ -0.29
Gm3139J3QK78 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Gm3139J3QK78 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Gm3139J3QK78 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Gm3139J3QK78 Gm37497-201ENSMUST00000195830 798 ntBASIC13.27□□□□□ -0.29
Gm3139J3QK78 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC13.27□□□□□ -0.29
Gm3139J3QK78 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Gm3139J3QK78 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Gm3139J3QK78 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Gm3139J3QK78 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Gm3139J3QK78 Gm38391-201ENSMUST00000191720 4069 ntBASIC13.27□□□□□ -0.29
Gm3139J3QK78 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
Gm3139J3QK78 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Gm3139J3QK78 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Gm3139J3QK78 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Gm3139J3QK78 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Gm3139J3QK78 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC13.27□□□□□ -0.29
Gm3139J3QK78 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Gm3139J3QK78 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Gm3139J3QK78 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC13.27□□□□□ -0.29
Gm3139J3QK78 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Gm3139J3QK78 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Gm3139J3QK78 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Gm3139J3QK78 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Gm3139J3QK78 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC13.27□□□□□ -0.29
Gm3139J3QK78 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Gm3139J3QK78 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC13.26□□□□□ -0.29
Gm3139J3QK78 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Gm3139J3QK78 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Gm3139J3QK78 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Gm3139J3QK78 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Gm3139J3QK78 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Gm3139J3QK78 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Gm3139J3QK78 Gm13226-201ENSMUST00000117838 404 ntBASIC13.26□□□□□ -0.29
Gm3139J3QK78 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Gm3139J3QK78 Gm6161-201ENSMUST00000121942 1102 ntBASIC13.26□□□□□ -0.29
Gm3139J3QK78 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC13.26□□□□□ -0.29
Gm3139J3QK78 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Gm3139J3QK78 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Gm3139J3QK78 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC13.26□□□□□ -0.29
Gm3139J3QK78 Gm6254-201ENSMUST00000168178 1072 ntBASIC13.26□□□□□ -0.29
Gm3139J3QK78 Gm6153-201ENSMUST00000172004 1058 ntBASIC13.26□□□□□ -0.29
Gm3139J3QK78 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Gm3139J3QK78 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Gm3139J3QK78 Gm45784-201ENSMUST00000188360 142 ntBASIC13.26□□□□□ -0.29
Gm3139J3QK78 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Gm3139J3QK78 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC13.26□□□□□ -0.29
Gm3139J3QK78 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Gm3139J3QK78 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC13.26□□□□□ -0.29
Gm3139J3QK78 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC13.26□□□□□ -0.29
Gm3139J3QK78 Gm5641-202ENSMUST00000198699 1080 ntBASIC13.26□□□□□ -0.29
Gm3139J3QK78 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC13.26□□□□□ -0.29
Gm3139J3QK78 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC13.26□□□□□ -0.29
Gm3139J3QK78 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Gm3139J3QK78 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Gm3139J3QK78 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Gm3139J3QK78 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Gm3139J3QK78 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Gm3139J3QK78 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Gm3139J3QK78 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Gm3139J3QK78 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Gm3139J3QK78 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Gm3139J3QK78 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Gm3139J3QK78 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC13.26□□□□□ -0.29
Gm3139J3QK78 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Gm3139J3QK78 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Gm3139J3QK78 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Gm3139J3QK78 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Gm3139J3QK78 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Gm3139J3QK78 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Gm3139J3QK78 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Gm3139J3QK78 Gm45684-201ENSMUST00000210244 1571 ntBASIC13.25□□□□□ -0.29
Gm3139J3QK78 AC155298.2-201ENSMUST00000225485 6226 ntBASIC13.25□□□□□ -0.29
Gm3139J3QK78 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Gm3139J3QK78 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Gm3139J3QK78 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC13.25□□□□□ -0.29
Gm3139J3QK78 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC13.25□□□□□ -0.29
Gm3139J3QK78 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Gm3139J3QK78 Gm12384-201ENSMUST00000119228 919 ntBASIC13.25□□□□□ -0.29
Gm3139J3QK78 Gm13369-201ENSMUST00000119442 987 ntBASIC13.25□□□□□ -0.29
Gm3139J3QK78 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC13.25□□□□□ -0.29
Gm3139J3QK78 Gm4271-201ENSMUST00000174444 973 ntBASIC13.25□□□□□ -0.29
Gm3139J3QK78 Gm27731-201ENSMUST00000185192 107 ntBASIC13.25□□□□□ -0.29
Gm3139J3QK78 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Gm3139J3QK78 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC13.25□□□□□ -0.29
Gm3139J3QK78 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC13.25□□□□□ -0.29
Gm3139J3QK78 AC122305.4-201ENSMUST00000216159 1206 ntBASIC13.25□□□□□ -0.29
Gm3139J3QK78 AC135669.1-202ENSMUST00000216742 540 ntBASIC13.25□□□□□ -0.29
Gm3139J3QK78 AC153962.4-201ENSMUST00000217878 242 ntBASIC13.25□□□□□ -0.29
Gm3139J3QK78 AC122459.1-201ENSMUST00000228373 885 ntBASIC13.25□□□□□ -0.29
Gm3139J3QK78 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC13.25□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 12.9 ms