Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Gm23935-201ENSMUST00000102303 57 ntBASIC12.01□□□□□ -0.49
Pcdh1F7BJK1 Gm24270-201ENSMUST00000102326 57 ntBASIC12.01□□□□□ -0.49
Pcdh1F7BJK1 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC12.01□□□□□ -0.49
Pcdh1F7BJK1 Gm15393-201ENSMUST00000120499 219 ntBASIC12.01□□□□□ -0.49
Pcdh1F7BJK1 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC12.01□□□□□ -0.49
Pcdh1F7BJK1 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC12.01□□□□□ -0.49
Pcdh1F7BJK1 Gm24245-201ENSMUST00000157318 57 ntBASIC12.01□□□□□ -0.49
Pcdh1F7BJK1 Gm27533-201ENSMUST00000183800 152 ntBASIC12.01□□□□□ -0.49
Pcdh1F7BJK1 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC12.01□□□□□ -0.49
Pcdh1F7BJK1 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdh1F7BJK1 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Pcdh1F7BJK1 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC12.01□□□□□ -0.49
Pcdh1F7BJK1 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdh1F7BJK1 Gm37269-201ENSMUST00000193906 1891 ntBASIC12.01□□□□□ -0.49
Pcdh1F7BJK1 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdh1F7BJK1 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdh1F7BJK1 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdh1F7BJK1 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Pcdh1F7BJK1 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Pcdh1F7BJK1 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Pcdh1F7BJK1 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Pcdh1F7BJK1 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdh1F7BJK1 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdh1F7BJK1 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Pcdh1F7BJK1 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC12□□□□□ -0.49
Pcdh1F7BJK1 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdh1F7BJK1 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC12□□□□□ -0.49
Pcdh1F7BJK1 Gm20554-201ENSMUST00000177421 2352 ntBASIC12□□□□□ -0.49
Pcdh1F7BJK1 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdh1F7BJK1 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdh1F7BJK1 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdh1F7BJK1 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC12□□□□□ -0.49
Pcdh1F7BJK1 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC12□□□□□ -0.49
Pcdh1F7BJK1 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdh1F7BJK1 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC12□□□□□ -0.49
Pcdh1F7BJK1 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdh1F7BJK1 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdh1F7BJK1 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC12□□□□□ -0.49
Pcdh1F7BJK1 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdh1F7BJK1 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdh1F7BJK1 Rnf17-202ENSMUST00000223627 2077 ntBASIC12□□□□□ -0.49
Pcdh1F7BJK1 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC12□□□□□ -0.49
Pcdh1F7BJK1 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdh1F7BJK1 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Pcdh1F7BJK1 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdh1F7BJK1 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC12□□□□□ -0.49
Pcdh1F7BJK1 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC12□□□□□ -0.49
Pcdh1F7BJK1 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC12□□□□□ -0.49
Pcdh1F7BJK1 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdh1F7BJK1 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Pcdh1F7BJK1 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC12□□□□□ -0.49
Pcdh1F7BJK1 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC12□□□□□ -0.49
Pcdh1F7BJK1 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdh1F7BJK1 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC12□□□□□ -0.49
Pcdh1F7BJK1 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC12□□□□□ -0.49
Pcdh1F7BJK1 Gm5425-201ENSMUST00000214125 459 ntBASIC12□□□□□ -0.49
Pcdh1F7BJK1 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC12□□□□□ -0.49
Pcdh1F7BJK1 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdh1F7BJK1 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Pcdh1F7BJK1 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
Pcdh1F7BJK1 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdh1F7BJK1 Gm13517-201ENSMUST00000120782 1495 ntBASIC12□□□□□ -0.49
Pcdh1F7BJK1 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdh1F7BJK1 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Pcdh1F7BJK1 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdh1F7BJK1 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdh1F7BJK1 Gm7049-201ENSMUST00000223520 1712 ntBASIC12□□□□□ -0.49
Pcdh1F7BJK1 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdh1F7BJK1 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdh1F7BJK1 Gm5466-201ENSMUST00000119395 1890 ntBASIC12□□□□□ -0.49
Pcdh1F7BJK1 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdh1F7BJK1 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdh1F7BJK1 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdh1F7BJK1 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdh1F7BJK1 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdh1F7BJK1 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdh1F7BJK1 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdh1F7BJK1 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdh1F7BJK1 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdh1F7BJK1 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdh1F7BJK1 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC11.99□□□□□ -0.49
Pcdh1F7BJK1 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdh1F7BJK1 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdh1F7BJK1 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdh1F7BJK1 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdh1F7BJK1 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Pcdh1F7BJK1 Gm20633-201ENSMUST00000176742 2831 ntBASIC11.99□□□□□ -0.49
Pcdh1F7BJK1 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Pcdh1F7BJK1 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdh1F7BJK1 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Pcdh1F7BJK1 Mir449b-201ENSMUST00000104833 80 ntBASIC11.99□□□□□ -0.49
Pcdh1F7BJK1 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdh1F7BJK1 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Pcdh1F7BJK1 Gm14701-201ENSMUST00000117156 348 ntBASIC11.99□□□□□ -0.49
Pcdh1F7BJK1 Gm15240-201ENSMUST00000118156 720 ntBASIC11.99□□□□□ -0.49
Pcdh1F7BJK1 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC11.99□□□□□ -0.49
Pcdh1F7BJK1 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdh1F7BJK1 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC11.99□□□□□ -0.49
Pcdh1F7BJK1 Gm5779-201ENSMUST00000218467 910 ntBASIC11.99□□□□□ -0.49
Pcdh1F7BJK1 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 84.9 ms