Protein–RNA interactions for Protein: D3YZU1

Shank1, SH3 and multiple ankyrin repeat domains protein 1, mousemouse

Predictions only

Length 2,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1D3YZU1 Gm4909-201ENSMUST00000118749 794 ntBASIC11.94□□□□□ -0.5
Shank1D3YZU1 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Shank1D3YZU1 B9d1os-201ENSMUST00000137010 674 ntBASIC11.94□□□□□ -0.5
Shank1D3YZU1 Gm25732-201ENSMUST00000175168 60 ntBASIC11.94□□□□□ -0.5
Shank1D3YZU1 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Shank1D3YZU1 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC11.94□□□□□ -0.5
Shank1D3YZU1 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Shank1D3YZU1 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Shank1D3YZU1 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC11.94□□□□□ -0.5
Shank1D3YZU1 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Shank1D3YZU1 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Shank1D3YZU1 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC11.94□□□□□ -0.5
Shank1D3YZU1 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Shank1D3YZU1 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC11.94□□□□□ -0.5
Shank1D3YZU1 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Shank1D3YZU1 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Shank1D3YZU1 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Shank1D3YZU1 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Shank1D3YZU1 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC11.94□□□□□ -0.5
Shank1D3YZU1 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Shank1D3YZU1 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Shank1D3YZU1 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Shank1D3YZU1 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC11.94□□□□□ -0.5
Shank1D3YZU1 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Shank1D3YZU1 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC11.94□□□□□ -0.5
Shank1D3YZU1 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC11.94□□□□□ -0.5
Shank1D3YZU1 Gm30285-201ENSMUST00000214614 422 ntBASIC11.94□□□□□ -0.5
Shank1D3YZU1 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Shank1D3YZU1 Eef1d-203ENSMUST00000089680 973 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Shank1D3YZU1 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Shank1D3YZU1 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC11.93□□□□□ -0.5
Shank1D3YZU1 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Shank1D3YZU1 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Shank1D3YZU1 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Shank1D3YZU1 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Shank1D3YZU1 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Shank1D3YZU1 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Shank1D3YZU1 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC11.93□□□□□ -0.5
Shank1D3YZU1 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Shank1D3YZU1 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Shank1D3YZU1 Gm43423-201ENSMUST00000198390 2094 ntBASIC11.93□□□□□ -0.5
Shank1D3YZU1 Rpl15-203ENSMUST00000100799 802 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
Shank1D3YZU1 Gm24830-201ENSMUST00000102024 166 ntBASIC11.93□□□□□ -0.5
Shank1D3YZU1 Gm25890-201ENSMUST00000177643 165 ntBASIC11.93□□□□□ -0.5
Shank1D3YZU1 Rnu1b2-201ENSMUST00000178073 165 ntBASIC11.93□□□□□ -0.5
Shank1D3YZU1 Rnu1b1-201ENSMUST00000178250 165 ntBASIC11.93□□□□□ -0.5
Shank1D3YZU1 Gm22614-201ENSMUST00000178300 165 ntBASIC11.93□□□□□ -0.5
Shank1D3YZU1 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC11.93□□□□□ -0.5
Shank1D3YZU1 Gm29264-201ENSMUST00000191240 1264 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Shank1D3YZU1 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC11.93□□□□□ -0.5
Shank1D3YZU1 Ntan1-201ENSMUST00000023362 1175 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Shank1D3YZU1 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Shank1D3YZU1 Gm22042-201ENSMUST00000082989 165 ntBASIC11.93□□□□□ -0.5
Shank1D3YZU1 Gm26232-201ENSMUST00000083360 166 ntBASIC11.93□□□□□ -0.5
Shank1D3YZU1 Gm24136-201ENSMUST00000083374 165 ntBASIC11.93□□□□□ -0.5
Shank1D3YZU1 Rnu1b6-201ENSMUST00000083839 166 ntBASIC11.93□□□□□ -0.5
Shank1D3YZU1 Gm26110-201ENSMUST00000083971 165 ntBASIC11.93□□□□□ -0.5
Shank1D3YZU1 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Shank1D3YZU1 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC11.93□□□□□ -0.5
Shank1D3YZU1 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC11.93□□□□□ -0.5
Shank1D3YZU1 Gm37411-201ENSMUST00000194180 2282 ntBASIC11.93□□□□□ -0.5
Shank1D3YZU1 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Shank1D3YZU1 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Shank1D3YZU1 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Shank1D3YZU1 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Shank1D3YZU1 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC11.93□□□□□ -0.5
Shank1D3YZU1 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Shank1D3YZU1 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC11.93□□□□□ -0.5
Shank1D3YZU1 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Shank1D3YZU1 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Shank1D3YZU1 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Shank1D3YZU1 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Shank1D3YZU1 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Shank1D3YZU1 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Shank1D3YZU1 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Shank1D3YZU1 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
Shank1D3YZU1 Gm12715-201ENSMUST00000121430 1128 ntBASIC11.92□□□□□ -0.5
Shank1D3YZU1 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Shank1D3YZU1 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Shank1D3YZU1 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC11.92□□□□□ -0.5
Shank1D3YZU1 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC11.92□□□□□ -0.5
Shank1D3YZU1 Mir6927-201ENSMUST00000184494 71 ntBASIC11.92□□□□□ -0.5
Shank1D3YZU1 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Shank1D3YZU1 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Shank1D3YZU1 Gm45504-201ENSMUST00000211407 2107 ntBASIC11.92□□□□□ -0.5
Shank1D3YZU1 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Shank1D3YZU1 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Shank1D3YZU1 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Shank1D3YZU1 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Shank1D3YZU1 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Shank1D3YZU1 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Shank1D3YZU1 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Shank1D3YZU1 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC11.92□□□□□ -0.5
Shank1D3YZU1 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Shank1D3YZU1 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC11.92□□□□□ -0.5
Shank1D3YZU1 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Shank1D3YZU1 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Shank1D3YZU1 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Shank1D3YZU1 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Shank1D3YZU1 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 62.2 ms