Protein–RNA interactions for Protein: D3YU81

Rfx8, DNA-binding protein RFX8, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx8D3YU81 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rfx8D3YU81 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Rfx8D3YU81 Gm14928-201ENSMUST00000120198 477 ntBASIC14.14□□□□□ -0.15
Rfx8D3YU81 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Rfx8D3YU81 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rfx8D3YU81 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Rfx8D3YU81 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rfx8D3YU81 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rfx8D3YU81 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Rfx8D3YU81 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rfx8D3YU81 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Rfx8D3YU81 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Rfx8D3YU81 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rfx8D3YU81 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rfx8D3YU81 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Rfx8D3YU81 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rfx8D3YU81 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC14.14□□□□□ -0.15
Rfx8D3YU81 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Rfx8D3YU81 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rfx8D3YU81 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rfx8D3YU81 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC14.14□□□□□ -0.15
Rfx8D3YU81 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rfx8D3YU81 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC14.14□□□□□ -0.15
Rfx8D3YU81 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC14.13□□□□□ -0.15
Rfx8D3YU81 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rfx8D3YU81 Gm45638-201ENSMUST00000211507 2878 ntBASIC14.13□□□□□ -0.15
Rfx8D3YU81 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Rfx8D3YU81 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rfx8D3YU81 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Rfx8D3YU81 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rfx8D3YU81 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC14.13□□□□□ -0.15
Rfx8D3YU81 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rfx8D3YU81 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC14.13□□□□□ -0.15
Rfx8D3YU81 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rfx8D3YU81 Gm10327-201ENSMUST00000105222 1002 ntBASIC14.13□□□□□ -0.15
Rfx8D3YU81 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC14.13□□□□□ -0.15
Rfx8D3YU81 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rfx8D3YU81 Gm23984-201ENSMUST00000157139 203 ntBASIC14.13□□□□□ -0.15
Rfx8D3YU81 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC14.13□□□□□ -0.15
Rfx8D3YU81 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC14.13□□□□□ -0.15
Rfx8D3YU81 H2-Pa-201ENSMUST00000182803 626 ntBASIC14.13□□□□□ -0.15
Rfx8D3YU81 Gm27701-201ENSMUST00000184498 110 ntBASIC14.13□□□□□ -0.15
Rfx8D3YU81 Gm6983-201ENSMUST00000214912 628 ntBASIC14.13□□□□□ -0.15
Rfx8D3YU81 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC14.13□□□□□ -0.15
Rfx8D3YU81 AC155252.1-201ENSMUST00000226462 1208 ntBASIC14.13□□□□□ -0.15
Rfx8D3YU81 AC125117.1-201ENSMUST00000228121 468 ntBASIC14.13□□□□□ -0.15
Rfx8D3YU81 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rfx8D3YU81 Gm6180-201ENSMUST00000065243 498 ntBASIC14.13□□□□□ -0.15
Rfx8D3YU81 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Rfx8D3YU81 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Rfx8D3YU81 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rfx8D3YU81 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rfx8D3YU81 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC14.13□□□□□ -0.15
Rfx8D3YU81 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rfx8D3YU81 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rfx8D3YU81 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rfx8D3YU81 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Rfx8D3YU81 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Rfx8D3YU81 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rfx8D3YU81 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Rfx8D3YU81 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Rfx8D3YU81 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC14.13□□□□□ -0.15
Rfx8D3YU81 Gm8775-201ENSMUST00000170943 1327 ntBASIC14.13□□□□□ -0.15
Rfx8D3YU81 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Rfx8D3YU81 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rfx8D3YU81 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Rfx8D3YU81 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rfx8D3YU81 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rfx8D3YU81 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rfx8D3YU81 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Rfx8D3YU81 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC14.12□□□□□ -0.15
Rfx8D3YU81 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Rfx8D3YU81 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC14.12□□□□□ -0.15
Rfx8D3YU81 Gm15429-201ENSMUST00000151268 798 ntBASIC14.12□□□□□ -0.15
Rfx8D3YU81 Gm7063-201ENSMUST00000186840 981 ntBASIC14.12□□□□□ -0.15
Rfx8D3YU81 Gm44397-201ENSMUST00000195950 113 ntBASIC14.12□□□□□ -0.15
Rfx8D3YU81 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC14.12□□□□□ -0.15
Rfx8D3YU81 AC073947.2-201ENSMUST00000215888 1130 ntBASIC14.12□□□□□ -0.15
Rfx8D3YU81 Gm7446-201ENSMUST00000221035 1240 ntBASIC14.12□□□□□ -0.15
Rfx8D3YU81 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rfx8D3YU81 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rfx8D3YU81 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rfx8D3YU81 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Rfx8D3YU81 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rfx8D3YU81 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Rfx8D3YU81 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rfx8D3YU81 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rfx8D3YU81 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Rfx8D3YU81 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rfx8D3YU81 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rfx8D3YU81 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Rfx8D3YU81 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Rfx8D3YU81 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rfx8D3YU81 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rfx8D3YU81 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rfx8D3YU81 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rfx8D3YU81 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rfx8D3YU81 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Rfx8D3YU81 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Rfx8D3YU81 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 54.2 ms