Protein–RNA interactions for Protein: B9EKI3

Tmf1, TATA element modulatory factor, mousemouse

Predictions only

Length 1,091 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmf1B9EKI3 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Tmf1B9EKI3 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Tmf1B9EKI3 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Tmf1B9EKI3 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Tmf1B9EKI3 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC18.01■□□□□ 0.47
Tmf1B9EKI3 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC18.01■□□□□ 0.47
Tmf1B9EKI3 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Tmf1B9EKI3 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Tmf1B9EKI3 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Tmf1B9EKI3 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC18.01■□□□□ 0.47
Tmf1B9EKI3 Mir1247-201ENSMUST00000116706 82 ntBASIC18.01■□□□□ 0.47
Tmf1B9EKI3 Gm16177-201ENSMUST00000120728 718 ntBASIC18.01■□□□□ 0.47
Tmf1B9EKI3 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Tmf1B9EKI3 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC18.01■□□□□ 0.47
Tmf1B9EKI3 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC18.01■□□□□ 0.47
Tmf1B9EKI3 Gm9299-201ENSMUST00000206392 1140 ntBASIC18.01■□□□□ 0.47
Tmf1B9EKI3 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Tmf1B9EKI3 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Tmf1B9EKI3 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC18.01■□□□□ 0.47
Tmf1B9EKI3 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Tmf1B9EKI3 Gm14371-201ENSMUST00000138925 1518 ntBASIC18.01■□□□□ 0.47
Tmf1B9EKI3 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Tmf1B9EKI3 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Tmf1B9EKI3 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Tmf1B9EKI3 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Tmf1B9EKI3 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Tmf1B9EKI3 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Tmf1B9EKI3 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Tmf1B9EKI3 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Tmf1B9EKI3 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Tmf1B9EKI3 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC18■□□□□ 0.47
Tmf1B9EKI3 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC18■□□□□ 0.47
Tmf1B9EKI3 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC18■□□□□ 0.47
Tmf1B9EKI3 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Tmf1B9EKI3 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC18■□□□□ 0.47
Tmf1B9EKI3 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Tmf1B9EKI3 Zdhhc4-208ENSMUST00000161915 1216 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Tmf1B9EKI3 Gm20033-203ENSMUST00000180912 796 ntTSL 5 BASIC18■□□□□ 0.47
Tmf1B9EKI3 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC18■□□□□ 0.47
Tmf1B9EKI3 Gm45784-201ENSMUST00000188360 142 ntBASIC18■□□□□ 0.47
Tmf1B9EKI3 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC18■□□□□ 0.47
Tmf1B9EKI3 AC154171.1-201ENSMUST00000224610 643 ntBASIC18■□□□□ 0.47
Tmf1B9EKI3 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC18■□□□□ 0.47
Tmf1B9EKI3 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Tmf1B9EKI3 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Tmf1B9EKI3 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Tmf1B9EKI3 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC18■□□□□ 0.47
Tmf1B9EKI3 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC18■□□□□ 0.47
Tmf1B9EKI3 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Tmf1B9EKI3 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC18■□□□□ 0.47
Tmf1B9EKI3 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Tmf1B9EKI3 Matn2-206ENSMUST00000228570 2798 ntBASIC18■□□□□ 0.47
Tmf1B9EKI3 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Tmf1B9EKI3 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
Tmf1B9EKI3 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Tmf1B9EKI3 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Tmf1B9EKI3 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Tmf1B9EKI3 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Tmf1B9EKI3 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Tmf1B9EKI3 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Tmf1B9EKI3 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Tmf1B9EKI3 Mir874-201ENSMUST00000104769 76 ntBASIC17.99■□□□□ 0.47
Tmf1B9EKI3 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC17.99■□□□□ 0.47
Tmf1B9EKI3 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Tmf1B9EKI3 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC17.99■□□□□ 0.47
Tmf1B9EKI3 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Tmf1B9EKI3 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC17.99■□□□□ 0.47
Tmf1B9EKI3 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC17.99■□□□□ 0.47
Tmf1B9EKI3 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Tmf1B9EKI3 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Tmf1B9EKI3 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC17.99■□□□□ 0.47
Tmf1B9EKI3 AC154276.1-201ENSMUST00000228874 1299 ntBASIC17.99■□□□□ 0.47
Tmf1B9EKI3 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Tmf1B9EKI3 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC17.99■□□□□ 0.47
Tmf1B9EKI3 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Tmf1B9EKI3 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC17.99■□□□□ 0.47
Tmf1B9EKI3 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Tmf1B9EKI3 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Tmf1B9EKI3 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Tmf1B9EKI3 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC17.99■□□□□ 0.47
Tmf1B9EKI3 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
Tmf1B9EKI3 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Tmf1B9EKI3 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Tmf1B9EKI3 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Tmf1B9EKI3 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC17.98■□□□□ 0.47
Tmf1B9EKI3 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC17.98■□□□□ 0.47
Tmf1B9EKI3 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Tmf1B9EKI3 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Tmf1B9EKI3 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC17.98■□□□□ 0.47
Tmf1B9EKI3 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Tmf1B9EKI3 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Tmf1B9EKI3 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Tmf1B9EKI3 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Tmf1B9EKI3 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Tmf1B9EKI3 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Tmf1B9EKI3 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Tmf1B9EKI3 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Tmf1B9EKI3 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Tmf1B9EKI3 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Tmf1B9EKI3 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms