Protein–RNA interactions for Protein: B5KM66

Syce3, Synaptonemal complex central element protein 3, mousemouse

Predictions only

Length 88 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syce3B5KM66 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Syce3B5KM66 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Syce3B5KM66 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Syce3B5KM66 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Syce3B5KM66 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Syce3B5KM66 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Syce3B5KM66 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Syce3B5KM66 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Syce3B5KM66 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Syce3B5KM66 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC15.23■□□□□ 0.03
Syce3B5KM66 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Syce3B5KM66 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Syce3B5KM66 Gm18766-201ENSMUST00000189811 808 ntBASIC15.23■□□□□ 0.03
Syce3B5KM66 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Syce3B5KM66 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Syce3B5KM66 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC15.23■□□□□ 0.03
Syce3B5KM66 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Syce3B5KM66 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Syce3B5KM66 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Syce3B5KM66 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Syce3B5KM66 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC15.23■□□□□ 0.03
Syce3B5KM66 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Syce3B5KM66 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Syce3B5KM66 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Syce3B5KM66 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Syce3B5KM66 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC15.23■□□□□ 0.03
Syce3B5KM66 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Syce3B5KM66 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Syce3B5KM66 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Syce3B5KM66 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Syce3B5KM66 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Syce3B5KM66 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Syce3B5KM66 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Syce3B5KM66 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC15.22■□□□□ 0.03
Syce3B5KM66 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Syce3B5KM66 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC15.22■□□□□ 0.03
Syce3B5KM66 Zfp125-201ENSMUST00000079237 2488 ntBASIC15.22■□□□□ 0.03
Syce3B5KM66 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Syce3B5KM66 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Syce3B5KM66 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Syce3B5KM66 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Syce3B5KM66 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Syce3B5KM66 Gm13385-201ENSMUST00000121089 220 ntBASIC15.22■□□□□ 0.03
Syce3B5KM66 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC15.22■□□□□ 0.03
Syce3B5KM66 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Syce3B5KM66 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Syce3B5KM66 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Syce3B5KM66 Gm29541-201ENSMUST00000191351 678 ntBASIC15.22■□□□□ 0.03
Syce3B5KM66 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC15.22■□□□□ 0.03
Syce3B5KM66 AC155252.2-201ENSMUST00000226946 680 ntBASIC15.22■□□□□ 0.03
Syce3B5KM66 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Syce3B5KM66 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Syce3B5KM66 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Syce3B5KM66 AC164702.1-201ENSMUST00000220135 2212 ntBASIC15.22■□□□□ 0.03
Syce3B5KM66 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Syce3B5KM66 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC15.22■□□□□ 0.03
Syce3B5KM66 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC15.22■□□□□ 0.03
Syce3B5KM66 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Syce3B5KM66 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Syce3B5KM66 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Syce3B5KM66 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Syce3B5KM66 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Syce3B5KM66 AC168058.1-201ENSMUST00000219521 2282 ntBASIC15.22■□□□□ 0.03
Syce3B5KM66 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Syce3B5KM66 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Syce3B5KM66 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Syce3B5KM66 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Syce3B5KM66 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.03
Syce3B5KM66 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Syce3B5KM66 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Syce3B5KM66 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Syce3B5KM66 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Syce3B5KM66 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Syce3B5KM66 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC15.21■□□□□ 0.03
Syce3B5KM66 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Syce3B5KM66 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Syce3B5KM66 CT025624.1-201ENSMUST00000224007 2700 ntBASIC15.21■□□□□ 0.03
Syce3B5KM66 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Syce3B5KM66 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Syce3B5KM66 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Syce3B5KM66 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Syce3B5KM66 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Syce3B5KM66 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC15.21■□□□□ 0.03
Syce3B5KM66 Mir7221-201ENSMUST00000184009 72 ntBASIC15.21■□□□□ 0.03
Syce3B5KM66 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC15.21■□□□□ 0.03
Syce3B5KM66 Gm45841-201ENSMUST00000207700 164 ntBASIC15.21■□□□□ 0.03
Syce3B5KM66 Gm16476-201ENSMUST00000221544 139 ntBASIC15.21■□□□□ 0.03
Syce3B5KM66 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC15.21■□□□□ 0.03
Syce3B5KM66 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Syce3B5KM66 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Syce3B5KM66 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Syce3B5KM66 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Syce3B5KM66 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Syce3B5KM66 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Syce3B5KM66 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Syce3B5KM66 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.03
Syce3B5KM66 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Syce3B5KM66 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Syce3B5KM66 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Syce3B5KM66 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 58.5 ms