Protein–RNA interactions for Protein: A0A0G2JDP3

Trav9n-2, T cell receptor alpha variable 9D-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9n-2A0A0G2JDP3 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC9.71□□□□□ -0.86
Trav9n-2A0A0G2JDP3 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC9.7□□□□□ -0.86
Trav9n-2A0A0G2JDP3 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Trav9n-2A0A0G2JDP3 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Trav9n-2A0A0G2JDP3 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC9.7□□□□□ -0.86
Trav9n-2A0A0G2JDP3 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Trav9n-2A0A0G2JDP3 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Trav9n-2A0A0G2JDP3 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Trav9n-2A0A0G2JDP3 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Trav9n-2A0A0G2JDP3 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Trav9n-2A0A0G2JDP3 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Trav9n-2A0A0G2JDP3 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Trav9n-2A0A0G2JDP3 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC9.7□□□□□ -0.86
Trav9n-2A0A0G2JDP3 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Trav9n-2A0A0G2JDP3 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Trav9n-2A0A0G2JDP3 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Trav9n-2A0A0G2JDP3 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Trav9n-2A0A0G2JDP3 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Trav9n-2A0A0G2JDP3 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC9.7□□□□□ -0.86
Trav9n-2A0A0G2JDP3 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC9.7□□□□□ -0.86
Trav9n-2A0A0G2JDP3 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Trav9n-2A0A0G2JDP3 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC9.7□□□□□ -0.86
Trav9n-2A0A0G2JDP3 Gm15321-201ENSMUST00000121290 288 ntBASIC9.7□□□□□ -0.86
Trav9n-2A0A0G2JDP3 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Trav9n-2A0A0G2JDP3 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Trav9n-2A0A0G2JDP3 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Trav9n-2A0A0G2JDP3 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC9.7□□□□□ -0.86
Trav9n-2A0A0G2JDP3 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC9.7□□□□□ -0.86
Trav9n-2A0A0G2JDP3 Gm5279-201ENSMUST00000199575 745 ntBASIC9.7□□□□□ -0.86
Trav9n-2A0A0G2JDP3 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC9.7□□□□□ -0.86
Trav9n-2A0A0G2JDP3 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Trav9n-2A0A0G2JDP3 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC9.7□□□□□ -0.86
Trav9n-2A0A0G2JDP3 AC124732.1-201ENSMUST00000221551 910 ntBASIC9.7□□□□□ -0.86
Trav9n-2A0A0G2JDP3 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Trav9n-2A0A0G2JDP3 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Trav9n-2A0A0G2JDP3 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC9.7□□□□□ -0.86
Trav9n-2A0A0G2JDP3 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Trav9n-2A0A0G2JDP3 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Trav9n-2A0A0G2JDP3 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Trav9n-2A0A0G2JDP3 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Trav9n-2A0A0G2JDP3 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Trav9n-2A0A0G2JDP3 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Trav9n-2A0A0G2JDP3 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Trav9n-2A0A0G2JDP3 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Trav9n-2A0A0G2JDP3 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Trav9n-2A0A0G2JDP3 AC139054.1-201ENSMUST00000226898 1598 ntBASIC9.7□□□□□ -0.86
Trav9n-2A0A0G2JDP3 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC9.7□□□□□ -0.86
Trav9n-2A0A0G2JDP3 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Trav9n-2A0A0G2JDP3 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC9.7□□□□□ -0.86
Trav9n-2A0A0G2JDP3 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Trav9n-2A0A0G2JDP3 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC9.7□□□□□ -0.86
Trav9n-2A0A0G2JDP3 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC9.7□□□□□ -0.86
Trav9n-2A0A0G2JDP3 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC9.7□□□□□ -0.86
Trav9n-2A0A0G2JDP3 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC9.7□□□□□ -0.86
Trav9n-2A0A0G2JDP3 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC9.7□□□□□ -0.86
Trav9n-2A0A0G2JDP3 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC9.7□□□□□ -0.86
Trav9n-2A0A0G2JDP3 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Trav9n-2A0A0G2JDP3 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC9.7□□□□□ -0.86
Trav9n-2A0A0G2JDP3 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Trav9n-2A0A0G2JDP3 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Trav9n-2A0A0G2JDP3 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Trav9n-2A0A0G2JDP3 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Trav9n-2A0A0G2JDP3 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC9.69□□□□□ -0.86
Trav9n-2A0A0G2JDP3 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Trav9n-2A0A0G2JDP3 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Trav9n-2A0A0G2JDP3 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Trav9n-2A0A0G2JDP3 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC9.69□□□□□ -0.86
Trav9n-2A0A0G2JDP3 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Trav9n-2A0A0G2JDP3 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Trav9n-2A0A0G2JDP3 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Trav9n-2A0A0G2JDP3 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC9.69□□□□□ -0.86
Trav9n-2A0A0G2JDP3 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC9.69□□□□□ -0.86
Trav9n-2A0A0G2JDP3 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC9.69□□□□□ -0.86
Trav9n-2A0A0G2JDP3 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Trav9n-2A0A0G2JDP3 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Trav9n-2A0A0G2JDP3 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Trav9n-2A0A0G2JDP3 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC9.69□□□□□ -0.86
Trav9n-2A0A0G2JDP3 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC9.69□□□□□ -0.86
Trav9n-2A0A0G2JDP3 Gm10576-201ENSMUST00000191927 825 ntBASIC9.69□□□□□ -0.86
Trav9n-2A0A0G2JDP3 Gm37019-201ENSMUST00000192133 2134 ntBASIC9.69□□□□□ -0.86
Trav9n-2A0A0G2JDP3 Gm7899-201ENSMUST00000192935 1897 ntBASIC9.69□□□□□ -0.86
Trav9n-2A0A0G2JDP3 Gm43094-201ENSMUST00000196549 921 ntBASIC9.69□□□□□ -0.86
Trav9n-2A0A0G2JDP3 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Trav9n-2A0A0G2JDP3 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC9.69□□□□□ -0.86
Trav9n-2A0A0G2JDP3 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC9.69□□□□□ -0.86
Trav9n-2A0A0G2JDP3 Gm45195-201ENSMUST00000205597 1008 ntBASIC9.69□□□□□ -0.86
Trav9n-2A0A0G2JDP3 Gm44855-201ENSMUST00000205725 362 ntBASIC9.69□□□□□ -0.86
Trav9n-2A0A0G2JDP3 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC9.69□□□□□ -0.86
Trav9n-2A0A0G2JDP3 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC9.69□□□□□ -0.86
Trav9n-2A0A0G2JDP3 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Trav9n-2A0A0G2JDP3 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC9.69□□□□□ -0.86
Trav9n-2A0A0G2JDP3 Wdyhv1-203ENSMUST00000226889 394 ntBASIC9.69□□□□□ -0.86
Trav9n-2A0A0G2JDP3 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Trav9n-2A0A0G2JDP3 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC9.69□□□□□ -0.86
Trav9n-2A0A0G2JDP3 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC9.69□□□□□ -0.86
Trav9n-2A0A0G2JDP3 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Trav9n-2A0A0G2JDP3 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Trav9n-2A0A0G2JDP3 Hist1h2al-201ENSMUST00000091708 339 ntBASIC9.69□□□□□ -0.86
Trav9n-2A0A0G2JDP3 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC9.69□□□□□ -0.86
Trav9n-2A0A0G2JDP3 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms