Protein–RNA interactions for Protein: A0A075B620

Trav7n-4, T cell receptor alpha variable 7N-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7n-4A0A075B620 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC10.07□□□□□ -0.8
Trav7n-4A0A075B620 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav7n-4A0A075B620 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC10.07□□□□□ -0.8
Trav7n-4A0A075B620 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav7n-4A0A075B620 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav7n-4A0A075B620 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav7n-4A0A075B620 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav7n-4A0A075B620 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav7n-4A0A075B620 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav7n-4A0A075B620 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC10.06□□□□□ -0.8
Trav7n-4A0A075B620 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav7n-4A0A075B620 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC10.06□□□□□ -0.8
Trav7n-4A0A075B620 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav7n-4A0A075B620 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Trav7n-4A0A075B620 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav7n-4A0A075B620 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC10.06□□□□□ -0.8
Trav7n-4A0A075B620 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC10.06□□□□□ -0.8
Trav7n-4A0A075B620 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav7n-4A0A075B620 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC10.06□□□□□ -0.8
Trav7n-4A0A075B620 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Trav7n-4A0A075B620 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Trav7n-4A0A075B620 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav7n-4A0A075B620 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC10.06□□□□□ -0.8
Trav7n-4A0A075B620 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Trav7n-4A0A075B620 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Trav7n-4A0A075B620 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav7n-4A0A075B620 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav7n-4A0A075B620 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav7n-4A0A075B620 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC10.06□□□□□ -0.8
Trav7n-4A0A075B620 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC10.06□□□□□ -0.8
Trav7n-4A0A075B620 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav7n-4A0A075B620 Gm11543-201ENSMUST00000120758 370 ntBASIC10.06□□□□□ -0.8
Trav7n-4A0A075B620 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC10.06□□□□□ -0.8
Trav7n-4A0A075B620 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Trav7n-4A0A075B620 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC10.06□□□□□ -0.8
Trav7n-4A0A075B620 Mir7221-201ENSMUST00000184009 72 ntBASIC10.06□□□□□ -0.8
Trav7n-4A0A075B620 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC10.06□□□□□ -0.8
Trav7n-4A0A075B620 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC10.06□□□□□ -0.8
Trav7n-4A0A075B620 Gm43347-201ENSMUST00000200226 580 ntBASIC10.06□□□□□ -0.8
Trav7n-4A0A075B620 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC10.06□□□□□ -0.8
Trav7n-4A0A075B620 Gm5364-201ENSMUST00000216789 889 ntBASIC10.06□□□□□ -0.8
Trav7n-4A0A075B620 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC10.06□□□□□ -0.8
Trav7n-4A0A075B620 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav7n-4A0A075B620 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav7n-4A0A075B620 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC10.06□□□□□ -0.8
Trav7n-4A0A075B620 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC10.06□□□□□ -0.8
Trav7n-4A0A075B620 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav7n-4A0A075B620 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav7n-4A0A075B620 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC10.06□□□□□ -0.8
Trav7n-4A0A075B620 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav7n-4A0A075B620 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC10.06□□□□□ -0.8
Trav7n-4A0A075B620 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav7n-4A0A075B620 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Trav7n-4A0A075B620 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC10.06□□□□□ -0.8
Trav7n-4A0A075B620 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav7n-4A0A075B620 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav7n-4A0A075B620 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC10.06□□□□□ -0.8
Trav7n-4A0A075B620 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC10.06□□□□□ -0.8
Trav7n-4A0A075B620 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Trav7n-4A0A075B620 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Trav7n-4A0A075B620 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav7n-4A0A075B620 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav7n-4A0A075B620 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC10.06□□□□□ -0.8
Trav7n-4A0A075B620 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC10.06□□□□□ -0.8
Trav7n-4A0A075B620 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav7n-4A0A075B620 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav7n-4A0A075B620 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav7n-4A0A075B620 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Trav7n-4A0A075B620 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav7n-4A0A075B620 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav7n-4A0A075B620 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav7n-4A0A075B620 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav7n-4A0A075B620 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav7n-4A0A075B620 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav7n-4A0A075B620 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav7n-4A0A075B620 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav7n-4A0A075B620 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
Trav7n-4A0A075B620 Adcy9-201ENSMUST00000005719 4457 ntAPPRIS P3 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav7n-4A0A075B620 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC10.05□□□□□ -0.8
Trav7n-4A0A075B620 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav7n-4A0A075B620 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Trav7n-4A0A075B620 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav7n-4A0A075B620 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC10.05□□□□□ -0.8
Trav7n-4A0A075B620 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav7n-4A0A075B620 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Trav7n-4A0A075B620 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav7n-4A0A075B620 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav7n-4A0A075B620 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Trav7n-4A0A075B620 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Trav7n-4A0A075B620 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav7n-4A0A075B620 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC10.05□□□□□ -0.8
Trav7n-4A0A075B620 Ighv1-51-201ENSMUST00000192903 354 ntBASIC10.05□□□□□ -0.8
Trav7n-4A0A075B620 Gm4971-201ENSMUST00000205991 1108 ntBASIC10.05□□□□□ -0.8
Trav7n-4A0A075B620 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav7n-4A0A075B620 AC131997.1-201ENSMUST00000228611 1229 ntBASIC10.05□□□□□ -0.8
Trav7n-4A0A075B620 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav7n-4A0A075B620 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav7n-4A0A075B620 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC10.05□□□□□ -0.8
Trav7n-4A0A075B620 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC10.05□□□□□ -0.8
Trav7n-4A0A075B620 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC10.05□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 38.4 ms