Protein–RNA interactions for Protein: Q9WUB7

Clcnka, Chloride channel protein ClC-Ka, mousemouse

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClcnkaQ9WUB7 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
ClcnkaQ9WUB7 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
ClcnkaQ9WUB7 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC12.32□□□□□ -0.44
ClcnkaQ9WUB7 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
ClcnkaQ9WUB7 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
ClcnkaQ9WUB7 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
ClcnkaQ9WUB7 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
ClcnkaQ9WUB7 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
ClcnkaQ9WUB7 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
ClcnkaQ9WUB7 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
ClcnkaQ9WUB7 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
ClcnkaQ9WUB7 Gm5866-201ENSMUST00000177881 973 ntBASIC12.32□□□□□ -0.44
ClcnkaQ9WUB7 Gm5354-201ENSMUST00000182417 973 ntBASIC12.32□□□□□ -0.44
ClcnkaQ9WUB7 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
ClcnkaQ9WUB7 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
ClcnkaQ9WUB7 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
ClcnkaQ9WUB7 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
ClcnkaQ9WUB7 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
ClcnkaQ9WUB7 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
ClcnkaQ9WUB7 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC12.32□□□□□ -0.44
ClcnkaQ9WUB7 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
ClcnkaQ9WUB7 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
ClcnkaQ9WUB7 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
ClcnkaQ9WUB7 Gm9279-201ENSMUST00000223175 1606 ntBASIC12.32□□□□□ -0.44
ClcnkaQ9WUB7 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
ClcnkaQ9WUB7 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
ClcnkaQ9WUB7 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
ClcnkaQ9WUB7 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
ClcnkaQ9WUB7 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
ClcnkaQ9WUB7 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC12.32□□□□□ -0.44
ClcnkaQ9WUB7 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC12.32□□□□□ -0.44
ClcnkaQ9WUB7 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
ClcnkaQ9WUB7 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
ClcnkaQ9WUB7 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
ClcnkaQ9WUB7 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
ClcnkaQ9WUB7 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC12.32□□□□□ -0.44
ClcnkaQ9WUB7 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
ClcnkaQ9WUB7 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
ClcnkaQ9WUB7 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
ClcnkaQ9WUB7 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
ClcnkaQ9WUB7 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
ClcnkaQ9WUB7 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
ClcnkaQ9WUB7 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
ClcnkaQ9WUB7 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
ClcnkaQ9WUB7 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
ClcnkaQ9WUB7 Gm45242-201ENSMUST00000210666 2129 ntBASIC12.31□□□□□ -0.44
ClcnkaQ9WUB7 AC117194.1-201ENSMUST00000224847 3002 ntBASIC12.31□□□□□ -0.44
ClcnkaQ9WUB7 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC12.31□□□□□ -0.44
ClcnkaQ9WUB7 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
ClcnkaQ9WUB7 Gm12485-201ENSMUST00000119641 291 ntBASIC12.31□□□□□ -0.44
ClcnkaQ9WUB7 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
ClcnkaQ9WUB7 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC12.31□□□□□ -0.44
ClcnkaQ9WUB7 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC12.31□□□□□ -0.44
ClcnkaQ9WUB7 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
ClcnkaQ9WUB7 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
ClcnkaQ9WUB7 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC12.31□□□□□ -0.44
ClcnkaQ9WUB7 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC12.31□□□□□ -0.44
ClcnkaQ9WUB7 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC12.31□□□□□ -0.44
ClcnkaQ9WUB7 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
ClcnkaQ9WUB7 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
ClcnkaQ9WUB7 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
ClcnkaQ9WUB7 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC12.31□□□□□ -0.44
ClcnkaQ9WUB7 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC12.31□□□□□ -0.44
ClcnkaQ9WUB7 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC12.31□□□□□ -0.44
ClcnkaQ9WUB7 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
ClcnkaQ9WUB7 Ssr1-203ENSMUST00000225246 1825 ntBASIC12.31□□□□□ -0.44
ClcnkaQ9WUB7 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
ClcnkaQ9WUB7 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
ClcnkaQ9WUB7 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
ClcnkaQ9WUB7 Gm44891-201ENSMUST00000208817 2223 ntBASIC12.31□□□□□ -0.44
ClcnkaQ9WUB7 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
ClcnkaQ9WUB7 Gm44241-201ENSMUST00000203230 1662 ntBASIC12.31□□□□□ -0.44
ClcnkaQ9WUB7 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
ClcnkaQ9WUB7 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
ClcnkaQ9WUB7 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
ClcnkaQ9WUB7 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
ClcnkaQ9WUB7 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC12.31□□□□□ -0.44
ClcnkaQ9WUB7 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
ClcnkaQ9WUB7 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
ClcnkaQ9WUB7 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC12.31□□□□□ -0.44
ClcnkaQ9WUB7 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
ClcnkaQ9WUB7 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC12.31□□□□□ -0.44
ClcnkaQ9WUB7 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
ClcnkaQ9WUB7 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
ClcnkaQ9WUB7 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
ClcnkaQ9WUB7 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
ClcnkaQ9WUB7 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
ClcnkaQ9WUB7 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
ClcnkaQ9WUB7 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
ClcnkaQ9WUB7 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
ClcnkaQ9WUB7 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
ClcnkaQ9WUB7 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
ClcnkaQ9WUB7 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
ClcnkaQ9WUB7 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
ClcnkaQ9WUB7 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
ClcnkaQ9WUB7 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
ClcnkaQ9WUB7 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
ClcnkaQ9WUB7 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
ClcnkaQ9WUB7 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
ClcnkaQ9WUB7 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 66.1 ms