Protein–RNA interactions for Protein: Q9JM99

Prg4, Proteoglycan 4, mousemouse

Predictions only

Length 1,054 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prg4Q9JM99 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Prg4Q9JM99 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Prg4Q9JM99 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Prg4Q9JM99 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Prg4Q9JM99 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Prg4Q9JM99 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Prg4Q9JM99 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Prg4Q9JM99 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Prg4Q9JM99 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Prg4Q9JM99 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Prg4Q9JM99 Gm12500-202ENSMUST00000186471 2428 ntBASIC12.16□□□□□ -0.46
Prg4Q9JM99 Gm43273-201ENSMUST00000199649 2594 ntBASIC12.16□□□□□ -0.46
Prg4Q9JM99 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Prg4Q9JM99 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC12.16□□□□□ -0.46
Prg4Q9JM99 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
Prg4Q9JM99 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Prg4Q9JM99 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Prg4Q9JM99 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Prg4Q9JM99 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Prg4Q9JM99 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Prg4Q9JM99 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Prg4Q9JM99 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Prg4Q9JM99 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Prg4Q9JM99 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC12.15□□□□□ -0.46
Prg4Q9JM99 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Prg4Q9JM99 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Prg4Q9JM99 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Prg4Q9JM99 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Prg4Q9JM99 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Prg4Q9JM99 Ksr1-207ENSMUST00000226282 5260 ntBASIC12.15□□□□□ -0.46
Prg4Q9JM99 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC12.15□□□□□ -0.46
Prg4Q9JM99 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Prg4Q9JM99 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC12.15□□□□□ -0.46
Prg4Q9JM99 Gm16177-201ENSMUST00000120728 718 ntBASIC12.15□□□□□ -0.46
Prg4Q9JM99 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC12.15□□□□□ -0.46
Prg4Q9JM99 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC12.15□□□□□ -0.46
Prg4Q9JM99 Pid1-205ENSMUST00000176720 450 ntTSL 5 BASIC12.15□□□□□ -0.46
Prg4Q9JM99 AY702102-202ENSMUST00000194651 1173 ntBASIC12.15□□□□□ -0.46
Prg4Q9JM99 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Prg4Q9JM99 Gm9299-201ENSMUST00000206392 1140 ntBASIC12.15□□□□□ -0.46
Prg4Q9JM99 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Prg4Q9JM99 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Prg4Q9JM99 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Prg4Q9JM99 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Prg4Q9JM99 AC101945.2-201ENSMUST00000227886 1377 ntBASIC12.15□□□□□ -0.46
Prg4Q9JM99 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Prg4Q9JM99 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC12.15□□□□□ -0.46
Prg4Q9JM99 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Prg4Q9JM99 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Prg4Q9JM99 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Prg4Q9JM99 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.47
Prg4Q9JM99 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Prg4Q9JM99 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Prg4Q9JM99 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Prg4Q9JM99 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Prg4Q9JM99 Gm38273-201ENSMUST00000194987 2382 ntBASIC12.14□□□□□ -0.47
Prg4Q9JM99 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC12.14□□□□□ -0.47
Prg4Q9JM99 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Prg4Q9JM99 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Prg4Q9JM99 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
Prg4Q9JM99 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Prg4Q9JM99 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Prg4Q9JM99 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Prg4Q9JM99 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Prg4Q9JM99 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC12.14□□□□□ -0.47
Prg4Q9JM99 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC12.14□□□□□ -0.47
Prg4Q9JM99 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Prg4Q9JM99 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Prg4Q9JM99 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Prg4Q9JM99 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Prg4Q9JM99 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC12.14□□□□□ -0.47
Prg4Q9JM99 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC12.14□□□□□ -0.47
Prg4Q9JM99 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Prg4Q9JM99 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Prg4Q9JM99 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Prg4Q9JM99 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Prg4Q9JM99 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Prg4Q9JM99 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Prg4Q9JM99 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Prg4Q9JM99 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Prg4Q9JM99 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC12.14□□□□□ -0.47
Prg4Q9JM99 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Prg4Q9JM99 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Prg4Q9JM99 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Prg4Q9JM99 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Prg4Q9JM99 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Prg4Q9JM99 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Prg4Q9JM99 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Prg4Q9JM99 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Prg4Q9JM99 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Prg4Q9JM99 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Prg4Q9JM99 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Prg4Q9JM99 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Prg4Q9JM99 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC12.14□□□□□ -0.47
Prg4Q9JM99 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC12.14□□□□□ -0.47
Prg4Q9JM99 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Prg4Q9JM99 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Prg4Q9JM99 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Prg4Q9JM99 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC12.13□□□□□ -0.47
Prg4Q9JM99 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms