Protein–RNA interactions for Protein: Q9JKX8

Upk3a, Uroplakin-3a, mousemouse

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3aQ9JKX8 Gm5356-201ENSMUST00000093326 615 ntBASIC12.84□□□□□ -0.35
Upk3aQ9JKX8 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Upk3aQ9JKX8 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Upk3aQ9JKX8 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Upk3aQ9JKX8 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Upk3aQ9JKX8 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Upk3aQ9JKX8 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Upk3aQ9JKX8 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Upk3aQ9JKX8 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Upk3aQ9JKX8 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Upk3aQ9JKX8 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Upk3aQ9JKX8 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Upk3aQ9JKX8 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Upk3aQ9JKX8 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC12.84□□□□□ -0.35
Upk3aQ9JKX8 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Upk3aQ9JKX8 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Upk3aQ9JKX8 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Upk3aQ9JKX8 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Upk3aQ9JKX8 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Upk3aQ9JKX8 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC12.83□□□□□ -0.35
Upk3aQ9JKX8 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.35
Upk3aQ9JKX8 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC12.83□□□□□ -0.35
Upk3aQ9JKX8 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.35
Upk3aQ9JKX8 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC12.83□□□□□ -0.35
Upk3aQ9JKX8 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Upk3aQ9JKX8 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Upk3aQ9JKX8 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Upk3aQ9JKX8 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC12.83□□□□□ -0.36
Upk3aQ9JKX8 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Upk3aQ9JKX8 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Upk3aQ9JKX8 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Upk3aQ9JKX8 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Upk3aQ9JKX8 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC12.83□□□□□ -0.36
Upk3aQ9JKX8 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC12.83□□□□□ -0.36
Upk3aQ9JKX8 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Upk3aQ9JKX8 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC12.83□□□□□ -0.36
Upk3aQ9JKX8 Gm11424-201ENSMUST00000121929 829 ntBASIC12.83□□□□□ -0.36
Upk3aQ9JKX8 Gm11978-201ENSMUST00000122315 466 ntBASIC12.83□□□□□ -0.36
Upk3aQ9JKX8 Gm10156-201ENSMUST00000122364 462 ntBASIC12.83□□□□□ -0.36
Upk3aQ9JKX8 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Upk3aQ9JKX8 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Upk3aQ9JKX8 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Upk3aQ9JKX8 Proscos-202ENSMUST00000178990 666 ntBASIC12.83□□□□□ -0.36
Upk3aQ9JKX8 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Upk3aQ9JKX8 Gm7067-201ENSMUST00000207698 1249 ntBASIC12.83□□□□□ -0.36
Upk3aQ9JKX8 Gm5035-201ENSMUST00000215581 927 ntBASIC12.83□□□□□ -0.36
Upk3aQ9JKX8 Gm17794-201ENSMUST00000220252 955 ntBASIC12.83□□□□□ -0.36
Upk3aQ9JKX8 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC12.83□□□□□ -0.36
Upk3aQ9JKX8 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Upk3aQ9JKX8 Gm43423-201ENSMUST00000198390 2094 ntBASIC12.83□□□□□ -0.36
Upk3aQ9JKX8 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Upk3aQ9JKX8 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Upk3aQ9JKX8 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Upk3aQ9JKX8 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Upk3aQ9JKX8 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Upk3aQ9JKX8 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Upk3aQ9JKX8 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Upk3aQ9JKX8 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Upk3aQ9JKX8 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Upk3aQ9JKX8 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Upk3aQ9JKX8 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Upk3aQ9JKX8 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Upk3aQ9JKX8 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Upk3aQ9JKX8 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Upk3aQ9JKX8 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Upk3aQ9JKX8 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Upk3aQ9JKX8 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Upk3aQ9JKX8 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Upk3aQ9JKX8 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Upk3aQ9JKX8 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Upk3aQ9JKX8 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC12.82□□□□□ -0.36
Upk3aQ9JKX8 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Upk3aQ9JKX8 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Upk3aQ9JKX8 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Upk3aQ9JKX8 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Upk3aQ9JKX8 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Upk3aQ9JKX8 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Upk3aQ9JKX8 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC12.82□□□□□ -0.36
Upk3aQ9JKX8 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Upk3aQ9JKX8 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC12.82□□□□□ -0.36
Upk3aQ9JKX8 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC12.82□□□□□ -0.36
Upk3aQ9JKX8 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC12.82□□□□□ -0.36
Upk3aQ9JKX8 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Upk3aQ9JKX8 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC12.82□□□□□ -0.36
Upk3aQ9JKX8 Gm9124-201ENSMUST00000191789 1092 ntBASIC12.82□□□□□ -0.36
Upk3aQ9JKX8 Gm9113-201ENSMUST00000192510 1018 ntBASIC12.82□□□□□ -0.36
Upk3aQ9JKX8 Gm9131-201ENSMUST00000193557 1089 ntBASIC12.82□□□□□ -0.36
Upk3aQ9JKX8 Gm9121-201ENSMUST00000193749 1071 ntBASIC12.82□□□□□ -0.36
Upk3aQ9JKX8 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC12.82□□□□□ -0.36
Upk3aQ9JKX8 AC154276.1-201ENSMUST00000228874 1299 ntBASIC12.82□□□□□ -0.36
Upk3aQ9JKX8 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Upk3aQ9JKX8 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Upk3aQ9JKX8 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Upk3aQ9JKX8 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC12.82□□□□□ -0.36
Upk3aQ9JKX8 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Upk3aQ9JKX8 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Upk3aQ9JKX8 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Upk3aQ9JKX8 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Upk3aQ9JKX8 Gm5939-201ENSMUST00000119613 2874 ntBASIC12.82□□□□□ -0.36
Upk3aQ9JKX8 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms