Protein–RNA interactions for Protein: Q9EQM3

Nkx2-4, Homeobox protein Nkx-2.4, mousemouse

Predictions only

Length 354 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-4Q9EQM3 7530416G11Rik-201ENSMUST00000178942 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nkx2-4Q9EQM3 Gm43701-201ENSMUST00000202047 391 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Nkx2-4Q9EQM3 Gm32025-201ENSMUST00000217960 307 ntBASIC13.64□□□□□ -0.23
Nkx2-4Q9EQM3 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Nkx2-4Q9EQM3 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nkx2-4Q9EQM3 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nkx2-4Q9EQM3 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nkx2-4Q9EQM3 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nkx2-4Q9EQM3 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nkx2-4Q9EQM3 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nkx2-4Q9EQM3 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC13.64□□□□□ -0.23
Nkx2-4Q9EQM3 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Nkx2-4Q9EQM3 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nkx2-4Q9EQM3 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Nkx2-4Q9EQM3 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nkx2-4Q9EQM3 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nkx2-4Q9EQM3 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nkx2-4Q9EQM3 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Nkx2-4Q9EQM3 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Nkx2-4Q9EQM3 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nkx2-4Q9EQM3 Gm44645-201ENSMUST00000205492 1653 ntBASIC13.63□□□□□ -0.23
Nkx2-4Q9EQM3 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Nkx2-4Q9EQM3 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nkx2-4Q9EQM3 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC13.63□□□□□ -0.23
Nkx2-4Q9EQM3 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Nkx2-4Q9EQM3 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nkx2-4Q9EQM3 Gm11628-201ENSMUST00000117568 171 ntBASIC13.63□□□□□ -0.23
Nkx2-4Q9EQM3 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC13.63□□□□□ -0.23
Nkx2-4Q9EQM3 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nkx2-4Q9EQM3 Gm25700-201ENSMUST00000177693 110 ntBASIC13.63□□□□□ -0.23
Nkx2-4Q9EQM3 Gm38139-201ENSMUST00000195806 704 ntTSL 2 BASIC13.63□□□□□ -0.23
Nkx2-4Q9EQM3 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
Nkx2-4Q9EQM3 Zfp36l1-203ENSMUST00000218835 292 ntTSL 3 BASIC13.63□□□□□ -0.23
Nkx2-4Q9EQM3 AC161537.1-201ENSMUST00000226199 1015 ntBASIC13.63□□□□□ -0.23
Nkx2-4Q9EQM3 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Nkx2-4Q9EQM3 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nkx2-4Q9EQM3 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC13.63□□□□□ -0.23
Nkx2-4Q9EQM3 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC13.63□□□□□ -0.23
Nkx2-4Q9EQM3 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Nkx2-4Q9EQM3 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Nkx2-4Q9EQM3 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nkx2-4Q9EQM3 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
Nkx2-4Q9EQM3 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC13.63□□□□□ -0.23
Nkx2-4Q9EQM3 Gm4366-201ENSMUST00000201488 1342 ntBASIC13.63□□□□□ -0.23
Nkx2-4Q9EQM3 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Nkx2-4Q9EQM3 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nkx2-4Q9EQM3 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nkx2-4Q9EQM3 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nkx2-4Q9EQM3 Gm5884-201ENSMUST00000036712 1479 ntBASIC13.62□□□□□ -0.23
Nkx2-4Q9EQM3 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Nkx2-4Q9EQM3 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nkx2-4Q9EQM3 Ksr1-207ENSMUST00000226282 5260 ntBASIC13.62□□□□□ -0.23
Nkx2-4Q9EQM3 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Nkx2-4Q9EQM3 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nkx2-4Q9EQM3 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Nkx2-4Q9EQM3 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC13.62□□□□□ -0.23
Nkx2-4Q9EQM3 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Nkx2-4Q9EQM3 1110002L01Rik-203ENSMUST00000179637 586 ntTSL 5 BASIC13.62□□□□□ -0.23
Nkx2-4Q9EQM3 Gm7467-201ENSMUST00000185173 652 ntBASIC13.62□□□□□ -0.23
Nkx2-4Q9EQM3 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC13.62□□□□□ -0.23
Nkx2-4Q9EQM3 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC13.62□□□□□ -0.23
Nkx2-4Q9EQM3 Gm37835-201ENSMUST00000193305 361 ntBASIC13.62□□□□□ -0.23
Nkx2-4Q9EQM3 Hmgb1-202ENSMUST00000093196 1092 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nkx2-4Q9EQM3 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nkx2-4Q9EQM3 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC13.62□□□□□ -0.23
Nkx2-4Q9EQM3 Gm9768-201ENSMUST00000206007 2861 ntBASIC13.62□□□□□ -0.23
Nkx2-4Q9EQM3 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Nkx2-4Q9EQM3 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nkx2-4Q9EQM3 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Nkx2-4Q9EQM3 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nkx2-4Q9EQM3 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nkx2-4Q9EQM3 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nkx2-4Q9EQM3 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Nkx2-4Q9EQM3 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Nkx2-4Q9EQM3 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nkx2-4Q9EQM3 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nkx2-4Q9EQM3 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nkx2-4Q9EQM3 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nkx2-4Q9EQM3 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nkx2-4Q9EQM3 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nkx2-4Q9EQM3 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Nkx2-4Q9EQM3 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nkx2-4Q9EQM3 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Nkx2-4Q9EQM3 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC13.61□□□□□ -0.23
Nkx2-4Q9EQM3 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nkx2-4Q9EQM3 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nkx2-4Q9EQM3 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nkx2-4Q9EQM3 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nkx2-4Q9EQM3 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nkx2-4Q9EQM3 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Nkx2-4Q9EQM3 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nkx2-4Q9EQM3 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Nkx2-4Q9EQM3 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC13.61□□□□□ -0.23
Nkx2-4Q9EQM3 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Nkx2-4Q9EQM3 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nkx2-4Q9EQM3 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Nkx2-4Q9EQM3 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC13.61□□□□□ -0.23
Nkx2-4Q9EQM3 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Nkx2-4Q9EQM3 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nkx2-4Q9EQM3 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 51.6 ms