Protein–RNA interactions for Protein: Q9D8P7

Gtf3c6, General transcription factor 3C polypeptide 6, mousemouse

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf3c6Q9D8P7 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Gtf3c6Q9D8P7 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Gtf3c6Q9D8P7 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Gtf3c6Q9D8P7 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Gtf3c6Q9D8P7 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Gtf3c6Q9D8P7 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Gtf3c6Q9D8P7 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Gtf3c6Q9D8P7 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Gtf3c6Q9D8P7 Esrp1-204ENSMUST00000108313 3696 ntTSL 5 BASIC14.38□□□□□ -0.11
Gtf3c6Q9D8P7 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Gtf3c6Q9D8P7 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Gtf3c6Q9D8P7 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Gtf3c6Q9D8P7 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Gtf3c6Q9D8P7 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Gtf3c6Q9D8P7 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Gtf3c6Q9D8P7 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC14.38□□□□□ -0.11
Gtf3c6Q9D8P7 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
Gtf3c6Q9D8P7 Gm12537-201ENSMUST00000119266 1002 ntBASIC14.38□□□□□ -0.11
Gtf3c6Q9D8P7 Gm11524-201ENSMUST00000119349 807 ntBASIC14.38□□□□□ -0.11
Gtf3c6Q9D8P7 Gm12070-201ENSMUST00000119551 1002 ntBASIC14.38□□□□□ -0.11
Gtf3c6Q9D8P7 Gm12485-201ENSMUST00000119641 291 ntBASIC14.38□□□□□ -0.11
Gtf3c6Q9D8P7 Gm12671-201ENSMUST00000119978 1002 ntBASIC14.38□□□□□ -0.11
Gtf3c6Q9D8P7 Gm13292-201ENSMUST00000120014 1000 ntBASIC14.38□□□□□ -0.11
Gtf3c6Q9D8P7 Gm12403-201ENSMUST00000121384 959 ntBASIC14.38□□□□□ -0.11
Gtf3c6Q9D8P7 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC14.38□□□□□ -0.11
Gtf3c6Q9D8P7 Gm26464-201ENSMUST00000157094 305 ntBASIC14.38□□□□□ -0.11
Gtf3c6Q9D8P7 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC14.38□□□□□ -0.11
Gtf3c6Q9D8P7 Gm10359-201ENSMUST00000180167 1002 ntBASIC14.38□□□□□ -0.11
Gtf3c6Q9D8P7 Gm12033-201ENSMUST00000180654 1002 ntBASIC14.38□□□□□ -0.11
Gtf3c6Q9D8P7 Gm5559-201ENSMUST00000180755 1002 ntBASIC14.38□□□□□ -0.11
Gtf3c6Q9D8P7 Gm4335-201ENSMUST00000182581 1004 ntBASIC14.38□□□□□ -0.11
Gtf3c6Q9D8P7 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Gtf3c6Q9D8P7 Gm38144-201ENSMUST00000192790 465 ntBASIC14.38□□□□□ -0.11
Gtf3c6Q9D8P7 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC14.38□□□□□ -0.11
Gtf3c6Q9D8P7 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC14.38□□□□□ -0.11
Gtf3c6Q9D8P7 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC14.38□□□□□ -0.11
Gtf3c6Q9D8P7 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC14.38□□□□□ -0.11
Gtf3c6Q9D8P7 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Gtf3c6Q9D8P7 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Gtf3c6Q9D8P7 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC14.38□□□□□ -0.11
Gtf3c6Q9D8P7 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC14.38□□□□□ -0.11
Gtf3c6Q9D8P7 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Gtf3c6Q9D8P7 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Gtf3c6Q9D8P7 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Gtf3c6Q9D8P7 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Gtf3c6Q9D8P7 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Gtf3c6Q9D8P7 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Gtf3c6Q9D8P7 Gm37844-201ENSMUST00000192473 4097 ntBASIC14.37□□□□□ -0.11
Gtf3c6Q9D8P7 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Gtf3c6Q9D8P7 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Gtf3c6Q9D8P7 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Gtf3c6Q9D8P7 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Gtf3c6Q9D8P7 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Gtf3c6Q9D8P7 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Gtf3c6Q9D8P7 CT009713.5-203ENSMUST00000224218 2079 ntBASIC14.37□□□□□ -0.11
Gtf3c6Q9D8P7 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Gtf3c6Q9D8P7 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Gtf3c6Q9D8P7 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Gtf3c6Q9D8P7 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Gtf3c6Q9D8P7 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
Gtf3c6Q9D8P7 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Gtf3c6Q9D8P7 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Gtf3c6Q9D8P7 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC14.37□□□□□ -0.11
Gtf3c6Q9D8P7 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Gtf3c6Q9D8P7 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC14.37□□□□□ -0.11
Gtf3c6Q9D8P7 Gm28760-201ENSMUST00000185995 736 ntBASIC14.37□□□□□ -0.11
Gtf3c6Q9D8P7 Gm45195-201ENSMUST00000205597 1008 ntBASIC14.37□□□□□ -0.11
Gtf3c6Q9D8P7 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Gtf3c6Q9D8P7 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC14.37□□□□□ -0.11
Gtf3c6Q9D8P7 Gm17870-201ENSMUST00000219489 1174 ntBASIC14.37□□□□□ -0.11
Gtf3c6Q9D8P7 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Gtf3c6Q9D8P7 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Gtf3c6Q9D8P7 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Gtf3c6Q9D8P7 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Gtf3c6Q9D8P7 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Gtf3c6Q9D8P7 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Gtf3c6Q9D8P7 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Gtf3c6Q9D8P7 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Gtf3c6Q9D8P7 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Gtf3c6Q9D8P7 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Gtf3c6Q9D8P7 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Gtf3c6Q9D8P7 Olfr1415-202ENSMUST00000204009 2815 ntAPPRIS P1 TSL 3 BASIC14.37□□□□□ -0.11
Gtf3c6Q9D8P7 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Gtf3c6Q9D8P7 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Gtf3c6Q9D8P7 Nono-201ENSMUST00000033673 2562 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Gtf3c6Q9D8P7 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Gtf3c6Q9D8P7 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Gtf3c6Q9D8P7 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Gtf3c6Q9D8P7 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC14.36□□□□□ -0.11
Gtf3c6Q9D8P7 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Gtf3c6Q9D8P7 Gm37795-201ENSMUST00000194216 2459 ntBASIC14.36□□□□□ -0.11
Gtf3c6Q9D8P7 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Gtf3c6Q9D8P7 AC238940.1-201ENSMUST00000225106 1858 ntBASIC14.36□□□□□ -0.11
Gtf3c6Q9D8P7 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Gtf3c6Q9D8P7 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Gtf3c6Q9D8P7 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Gtf3c6Q9D8P7 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Gtf3c6Q9D8P7 Prpf40b-208ENSMUST00000136980 3047 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Gtf3c6Q9D8P7 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC14.36□□□□□ -0.11
Gtf3c6Q9D8P7 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 39.2 ms