Protein–RNA interactions for Protein: Q9D883

U2af1, Splicing factor U2AF 35 kDa subunit, mousemouse

Known RBP Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2af1Q9D883 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
U2af1Q9D883 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
U2af1Q9D883 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
U2af1Q9D883 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
U2af1Q9D883 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
U2af1Q9D883 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
U2af1Q9D883 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
U2af1Q9D883 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
U2af1Q9D883 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC17.54■□□□□ 0.4
U2af1Q9D883 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
U2af1Q9D883 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC17.54■□□□□ 0.4
U2af1Q9D883 Gm27331-201ENSMUST00000183705 60 ntBASIC17.54■□□□□ 0.4
U2af1Q9D883 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC17.54■□□□□ 0.4
U2af1Q9D883 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC17.54■□□□□ 0.4
U2af1Q9D883 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC17.54■□□□□ 0.4
U2af1Q9D883 AC134335.2-201ENSMUST00000227660 440 ntBASIC17.54■□□□□ 0.4
U2af1Q9D883 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
U2af1Q9D883 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
U2af1Q9D883 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
U2af1Q9D883 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
U2af1Q9D883 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC17.54■□□□□ 0.4
U2af1Q9D883 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC17.54■□□□□ 0.4
U2af1Q9D883 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
U2af1Q9D883 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
U2af1Q9D883 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
U2af1Q9D883 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC17.53■□□□□ 0.4
U2af1Q9D883 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
U2af1Q9D883 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
U2af1Q9D883 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
U2af1Q9D883 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC17.53■□□□□ 0.4
U2af1Q9D883 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
U2af1Q9D883 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
U2af1Q9D883 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
U2af1Q9D883 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
U2af1Q9D883 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
U2af1Q9D883 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
U2af1Q9D883 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
U2af1Q9D883 Mir1982-201ENSMUST00000157368 74 ntBASIC17.53■□□□□ 0.4
U2af1Q9D883 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC17.53■□□□□ 0.4
U2af1Q9D883 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
U2af1Q9D883 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC17.53■□□□□ 0.4
U2af1Q9D883 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC17.53■□□□□ 0.4
U2af1Q9D883 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC17.53■□□□□ 0.4
U2af1Q9D883 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
U2af1Q9D883 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
U2af1Q9D883 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
U2af1Q9D883 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
U2af1Q9D883 Gm43399-201ENSMUST00000202546 2374 ntBASIC17.53■□□□□ 0.4
U2af1Q9D883 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
U2af1Q9D883 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
U2af1Q9D883 Gm11405-201ENSMUST00000118689 1556 ntBASIC17.53■□□□□ 0.4
U2af1Q9D883 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
U2af1Q9D883 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
U2af1Q9D883 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
U2af1Q9D883 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
U2af1Q9D883 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC17.52■□□□□ 0.4
U2af1Q9D883 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
U2af1Q9D883 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
U2af1Q9D883 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
U2af1Q9D883 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
U2af1Q9D883 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
U2af1Q9D883 Gm10327-201ENSMUST00000105222 1002 ntBASIC17.52■□□□□ 0.4
U2af1Q9D883 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
U2af1Q9D883 Gm13369-201ENSMUST00000119442 987 ntBASIC17.52■□□□□ 0.4
U2af1Q9D883 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC17.52■□□□□ 0.4
U2af1Q9D883 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC17.52■□□□□ 0.4
U2af1Q9D883 Gm44069-201ENSMUST00000204898 506 ntBASIC17.52■□□□□ 0.4
U2af1Q9D883 Gm9299-201ENSMUST00000206392 1140 ntBASIC17.52■□□□□ 0.4
U2af1Q9D883 Gm29705-201ENSMUST00000212598 474 ntBASIC17.52■□□□□ 0.4
U2af1Q9D883 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
U2af1Q9D883 Gm16372-201ENSMUST00000073088 450 ntBASIC17.52■□□□□ 0.4
U2af1Q9D883 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
U2af1Q9D883 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
U2af1Q9D883 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
U2af1Q9D883 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
U2af1Q9D883 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
U2af1Q9D883 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC17.52■□□□□ 0.39
U2af1Q9D883 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
U2af1Q9D883 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
U2af1Q9D883 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
U2af1Q9D883 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC17.52■□□□□ 0.39
U2af1Q9D883 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
U2af1Q9D883 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
U2af1Q9D883 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
U2af1Q9D883 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
U2af1Q9D883 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
U2af1Q9D883 AC154262.2-201ENSMUST00000224310 2293 ntBASIC17.51■□□□□ 0.39
U2af1Q9D883 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
U2af1Q9D883 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
U2af1Q9D883 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
U2af1Q9D883 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
U2af1Q9D883 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC17.51■□□□□ 0.39
U2af1Q9D883 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
U2af1Q9D883 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
U2af1Q9D883 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
U2af1Q9D883 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC17.51■□□□□ 0.39
U2af1Q9D883 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC17.51■□□□□ 0.39
U2af1Q9D883 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
U2af1Q9D883 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
U2af1Q9D883 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 49.1 ms