Protein–RNA interactions for Protein: Q9D071

Mms19, MMS19 nucleotide excision repair protein homolog, mousemouse

Predictions only

Length 1,031 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mms19Q9D071 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Mms19Q9D071 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Mms19Q9D071 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Mms19Q9D071 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Mms19Q9D071 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
Mms19Q9D071 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Mms19Q9D071 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Mms19Q9D071 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC14.29□□□□□ -0.12
Mms19Q9D071 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Mms19Q9D071 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Mms19Q9D071 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Mms19Q9D071 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Mms19Q9D071 Gm13886-201ENSMUST00000117876 1183 ntBASIC14.29□□□□□ -0.12
Mms19Q9D071 Mir1894-201ENSMUST00000122802 81 ntBASIC14.29□□□□□ -0.12
Mms19Q9D071 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Mms19Q9D071 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC14.29□□□□□ -0.12
Mms19Q9D071 Gm6244-201ENSMUST00000178732 841 ntBASIC14.29□□□□□ -0.12
Mms19Q9D071 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC14.29□□□□□ -0.12
Mms19Q9D071 Gm38144-201ENSMUST00000192790 465 ntBASIC14.29□□□□□ -0.12
Mms19Q9D071 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC14.29□□□□□ -0.12
Mms19Q9D071 Gm5035-201ENSMUST00000215581 927 ntBASIC14.29□□□□□ -0.12
Mms19Q9D071 AC073947.2-201ENSMUST00000215888 1130 ntBASIC14.29□□□□□ -0.12
Mms19Q9D071 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Mms19Q9D071 Gm5356-201ENSMUST00000093326 615 ntBASIC14.29□□□□□ -0.12
Mms19Q9D071 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Mms19Q9D071 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Mms19Q9D071 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Mms19Q9D071 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Mms19Q9D071 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Mms19Q9D071 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Mms19Q9D071 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Mms19Q9D071 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC14.29□□□□□ -0.12
Mms19Q9D071 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Mms19Q9D071 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Mms19Q9D071 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Mms19Q9D071 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Mms19Q9D071 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC14.29□□□□□ -0.12
Mms19Q9D071 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Mms19Q9D071 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Mms19Q9D071 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Mms19Q9D071 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Mms19Q9D071 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Mms19Q9D071 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Mms19Q9D071 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Mms19Q9D071 Gm13730-201ENSMUST00000121036 1462 ntBASIC14.28□□□□□ -0.12
Mms19Q9D071 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Mms19Q9D071 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Mms19Q9D071 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Mms19Q9D071 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Mms19Q9D071 Gm37748-201ENSMUST00000194379 1140 ntBASIC14.28□□□□□ -0.12
Mms19Q9D071 Gm5276-201ENSMUST00000196683 1047 ntBASIC14.28□□□□□ -0.12
Mms19Q9D071 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Mms19Q9D071 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Mms19Q9D071 Gm7287-201ENSMUST00000205267 602 ntBASIC14.28□□□□□ -0.12
Mms19Q9D071 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
Mms19Q9D071 Gm17794-201ENSMUST00000220252 955 ntBASIC14.28□□□□□ -0.12
Mms19Q9D071 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC14.28□□□□□ -0.12
Mms19Q9D071 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Mms19Q9D071 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Mms19Q9D071 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Mms19Q9D071 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Mms19Q9D071 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC14.28□□□□□ -0.12
Mms19Q9D071 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Mms19Q9D071 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Mms19Q9D071 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Mms19Q9D071 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Mms19Q9D071 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
Mms19Q9D071 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Mms19Q9D071 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Mms19Q9D071 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Mms19Q9D071 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Mms19Q9D071 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Mms19Q9D071 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Mms19Q9D071 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Mms19Q9D071 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Mms19Q9D071 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Mms19Q9D071 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Mms19Q9D071 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC14.27□□□□□ -0.12
Mms19Q9D071 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Mms19Q9D071 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Mms19Q9D071 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Mms19Q9D071 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Mms19Q9D071 Gm42769-201ENSMUST00000198576 1659 ntBASIC14.27□□□□□ -0.12
Mms19Q9D071 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Mms19Q9D071 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Mms19Q9D071 AC139350.1-201ENSMUST00000227064 1594 ntBASIC14.27□□□□□ -0.12
Mms19Q9D071 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Mms19Q9D071 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Mms19Q9D071 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Mms19Q9D071 Gm8775-201ENSMUST00000170943 1327 ntBASIC14.27□□□□□ -0.12
Mms19Q9D071 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC14.27□□□□□ -0.13
Mms19Q9D071 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.13
Mms19Q9D071 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC14.27□□□□□ -0.13
Mms19Q9D071 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC14.27□□□□□ -0.13
Mms19Q9D071 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Mms19Q9D071 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Mms19Q9D071 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC14.27□□□□□ -0.13
Mms19Q9D071 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC14.27□□□□□ -0.13
Mms19Q9D071 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Mms19Q9D071 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 38.6 ms