Protein–RNA interactions for Protein: Q9CY50

Ssr1, Translocon-associated protein subunit alpha, mousemouse

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr1Q9CY50 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC14.55□□□□□ -0.08
Ssr1Q9CY50 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ssr1Q9CY50 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Ssr1Q9CY50 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ssr1Q9CY50 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ssr1Q9CY50 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ssr1Q9CY50 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ssr1Q9CY50 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ssr1Q9CY50 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Ssr1Q9CY50 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Ssr1Q9CY50 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ssr1Q9CY50 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ssr1Q9CY50 Gm7336-201ENSMUST00000107041 1232 ntBASIC14.55□□□□□ -0.08
Ssr1Q9CY50 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ssr1Q9CY50 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ssr1Q9CY50 Gm15693-201ENSMUST00000120470 637 ntBASIC14.55□□□□□ -0.08
Ssr1Q9CY50 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Ssr1Q9CY50 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC14.55□□□□□ -0.08
Ssr1Q9CY50 Gm38294-201ENSMUST00000192831 381 ntBASIC14.55□□□□□ -0.08
Ssr1Q9CY50 Gm8396-201ENSMUST00000057361 823 ntBASIC14.55□□□□□ -0.08
Ssr1Q9CY50 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Ssr1Q9CY50 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Ssr1Q9CY50 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ssr1Q9CY50 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ssr1Q9CY50 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ssr1Q9CY50 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ssr1Q9CY50 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ssr1Q9CY50 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ssr1Q9CY50 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Ssr1Q9CY50 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Ssr1Q9CY50 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ssr1Q9CY50 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ssr1Q9CY50 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC14.55□□□□□ -0.08
Ssr1Q9CY50 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ssr1Q9CY50 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Ssr1Q9CY50 AC154404.1-201ENSMUST00000223601 2077 ntBASIC14.54□□□□□ -0.08
Ssr1Q9CY50 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ssr1Q9CY50 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Ssr1Q9CY50 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ssr1Q9CY50 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Ssr1Q9CY50 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC14.54□□□□□ -0.08
Ssr1Q9CY50 Gm15393-201ENSMUST00000120499 219 ntBASIC14.54□□□□□ -0.08
Ssr1Q9CY50 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ssr1Q9CY50 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Ssr1Q9CY50 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Ssr1Q9CY50 Gm22175-201ENSMUST00000175007 78 ntBASIC14.54□□□□□ -0.08
Ssr1Q9CY50 Gm37277-201ENSMUST00000194052 1111 ntBASIC14.54□□□□□ -0.08
Ssr1Q9CY50 AC166997.1-201ENSMUST00000225122 572 ntBASIC14.54□□□□□ -0.08
Ssr1Q9CY50 AC156016.3-201ENSMUST00000228623 344 ntBASIC14.54□□□□□ -0.08
Ssr1Q9CY50 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ssr1Q9CY50 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Ssr1Q9CY50 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ssr1Q9CY50 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Ssr1Q9CY50 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ssr1Q9CY50 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ssr1Q9CY50 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC14.54□□□□□ -0.08
Ssr1Q9CY50 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ssr1Q9CY50 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ssr1Q9CY50 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Ssr1Q9CY50 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Ssr1Q9CY50 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ssr1Q9CY50 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC14.54□□□□□ -0.08
Ssr1Q9CY50 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Ssr1Q9CY50 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Ssr1Q9CY50 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ssr1Q9CY50 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ssr1Q9CY50 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ssr1Q9CY50 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Ssr1Q9CY50 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
Ssr1Q9CY50 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Ssr1Q9CY50 Car10-206ENSMUST00000107863 3334 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ssr1Q9CY50 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ssr1Q9CY50 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ssr1Q9CY50 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Ssr1Q9CY50 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ssr1Q9CY50 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Ssr1Q9CY50 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ssr1Q9CY50 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ssr1Q9CY50 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Ssr1Q9CY50 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ssr1Q9CY50 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ssr1Q9CY50 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ssr1Q9CY50 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ssr1Q9CY50 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ssr1Q9CY50 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC14.53□□□□□ -0.08
Ssr1Q9CY50 Gm11557-201ENSMUST00000120200 1008 ntBASIC14.53□□□□□ -0.08
Ssr1Q9CY50 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Ssr1Q9CY50 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC14.53□□□□□ -0.08
Ssr1Q9CY50 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC14.53□□□□□ -0.08
Ssr1Q9CY50 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
Ssr1Q9CY50 Gm8927-201ENSMUST00000181978 981 ntBASIC14.53□□□□□ -0.08
Ssr1Q9CY50 Gm17837-201ENSMUST00000186435 985 ntBASIC14.53□□□□□ -0.08
Ssr1Q9CY50 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Ssr1Q9CY50 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC14.53□□□□□ -0.08
Ssr1Q9CY50 AC153872.1-201ENSMUST00000199539 128 ntBASIC14.53□□□□□ -0.08
Ssr1Q9CY50 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Ssr1Q9CY50 Rbfox2-208ENSMUST00000227930 1218 ntBASIC14.53□□□□□ -0.08
Ssr1Q9CY50 Gm3222-201ENSMUST00000071282 990 ntBASIC14.53□□□□□ -0.08
Ssr1Q9CY50 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Ssr1Q9CY50 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC14.53□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 87.1 ms