Protein–RNA interactions for Protein: Q99NB9

Sf3b1, Splicing factor 3B subunit 1, mousemouse

Known RBP Predictions only

Length 1,304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b1Q99NB9 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Sf3b1Q99NB9 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC14.14□□□□□ -0.15
Sf3b1Q99NB9 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sf3b1Q99NB9 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC14.14□□□□□ -0.15
Sf3b1Q99NB9 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC14.14□□□□□ -0.15
Sf3b1Q99NB9 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sf3b1Q99NB9 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sf3b1Q99NB9 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sf3b1Q99NB9 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sf3b1Q99NB9 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sf3b1Q99NB9 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Sf3b1Q99NB9 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sf3b1Q99NB9 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sf3b1Q99NB9 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sf3b1Q99NB9 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sf3b1Q99NB9 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
Sf3b1Q99NB9 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sf3b1Q99NB9 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sf3b1Q99NB9 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sf3b1Q99NB9 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sf3b1Q99NB9 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC14.14□□□□□ -0.15
Sf3b1Q99NB9 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sf3b1Q99NB9 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sf3b1Q99NB9 Gm38577-201ENSMUST00000221531 4545 ntBASIC14.14□□□□□ -0.15
Sf3b1Q99NB9 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sf3b1Q99NB9 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sf3b1Q99NB9 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sf3b1Q99NB9 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sf3b1Q99NB9 Gm5940-201ENSMUST00000117582 1068 ntBASIC14.14□□□□□ -0.15
Sf3b1Q99NB9 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC14.14□□□□□ -0.15
Sf3b1Q99NB9 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sf3b1Q99NB9 Gm8801-201ENSMUST00000173255 1064 ntBASIC14.14□□□□□ -0.15
Sf3b1Q99NB9 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC14.14□□□□□ -0.15
Sf3b1Q99NB9 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Sf3b1Q99NB9 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC14.14□□□□□ -0.15
Sf3b1Q99NB9 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
Sf3b1Q99NB9 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sf3b1Q99NB9 Gm7399-201ENSMUST00000032395 858 ntBASIC14.14□□□□□ -0.15
Sf3b1Q99NB9 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sf3b1Q99NB9 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sf3b1Q99NB9 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sf3b1Q99NB9 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Sf3b1Q99NB9 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sf3b1Q99NB9 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sf3b1Q99NB9 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sf3b1Q99NB9 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sf3b1Q99NB9 Gm18222-201ENSMUST00000202416 1387 ntBASIC14.13□□□□□ -0.15
Sf3b1Q99NB9 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Sf3b1Q99NB9 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC14.13□□□□□ -0.15
Sf3b1Q99NB9 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sf3b1Q99NB9 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC14.13□□□□□ -0.15
Sf3b1Q99NB9 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC14.13□□□□□ -0.15
Sf3b1Q99NB9 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC14.13□□□□□ -0.15
Sf3b1Q99NB9 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Sf3b1Q99NB9 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Sf3b1Q99NB9 Gm11661-201ENSMUST00000121761 1327 ntBASIC14.13□□□□□ -0.15
Sf3b1Q99NB9 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sf3b1Q99NB9 AC121805.2-201ENSMUST00000218808 2538 ntBASIC14.13□□□□□ -0.15
Sf3b1Q99NB9 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sf3b1Q99NB9 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Sf3b1Q99NB9 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sf3b1Q99NB9 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sf3b1Q99NB9 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC14.13□□□□□ -0.15
Sf3b1Q99NB9 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Sf3b1Q99NB9 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Sf3b1Q99NB9 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC14.13□□□□□ -0.15
Sf3b1Q99NB9 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC14.13□□□□□ -0.15
Sf3b1Q99NB9 Gm26927-201ENSMUST00000182385 965 ntBASIC14.13□□□□□ -0.15
Sf3b1Q99NB9 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Sf3b1Q99NB9 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC14.13□□□□□ -0.15
Sf3b1Q99NB9 Gm19184-201ENSMUST00000196798 928 ntBASIC14.13□□□□□ -0.15
Sf3b1Q99NB9 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC14.13□□□□□ -0.15
Sf3b1Q99NB9 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Sf3b1Q99NB9 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Sf3b1Q99NB9 Gm18054-201ENSMUST00000207539 555 ntBASIC14.13□□□□□ -0.15
Sf3b1Q99NB9 Gm45880-201ENSMUST00000213041 853 ntBASIC14.13□□□□□ -0.15
Sf3b1Q99NB9 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Sf3b1Q99NB9 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC14.13□□□□□ -0.15
Sf3b1Q99NB9 Gm10268-201ENSMUST00000085340 555 ntBASIC14.13□□□□□ -0.15
Sf3b1Q99NB9 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sf3b1Q99NB9 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sf3b1Q99NB9 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Sf3b1Q99NB9 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Sf3b1Q99NB9 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Sf3b1Q99NB9 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Sf3b1Q99NB9 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sf3b1Q99NB9 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sf3b1Q99NB9 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sf3b1Q99NB9 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sf3b1Q99NB9 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sf3b1Q99NB9 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sf3b1Q99NB9 Gm45684-201ENSMUST00000210244 1571 ntBASIC14.12□□□□□ -0.15
Sf3b1Q99NB9 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Sf3b1Q99NB9 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sf3b1Q99NB9 Gm2420-202ENSMUST00000202224 2249 ntBASIC14.12□□□□□ -0.15
Sf3b1Q99NB9 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sf3b1Q99NB9 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sf3b1Q99NB9 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sf3b1Q99NB9 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sf3b1Q99NB9 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 41.9 ms