Protein–RNA interactions for Protein: Q99MB1

Tlr3, Toll-like receptor 3, mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tlr3Q99MB1 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tlr3Q99MB1 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Tlr3Q99MB1 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tlr3Q99MB1 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Tlr3Q99MB1 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Tlr3Q99MB1 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Tlr3Q99MB1 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
Tlr3Q99MB1 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tlr3Q99MB1 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Tlr3Q99MB1 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tlr3Q99MB1 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Tlr3Q99MB1 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Tlr3Q99MB1 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Tlr3Q99MB1 Gm43134-201ENSMUST00000199434 1886 ntBASIC14.34□□□□□ -0.11
Tlr3Q99MB1 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC14.34□□□□□ -0.11
Tlr3Q99MB1 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Tlr3Q99MB1 Gm13689-201ENSMUST00000119360 685 ntBASIC14.34□□□□□ -0.11
Tlr3Q99MB1 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC14.34□□□□□ -0.11
Tlr3Q99MB1 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Tlr3Q99MB1 Gm16342-201ENSMUST00000124025 1025 ntBASIC14.34□□□□□ -0.11
Tlr3Q99MB1 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Tlr3Q99MB1 Mir7654-201ENSMUST00000185082 70 ntBASIC14.34□□□□□ -0.11
Tlr3Q99MB1 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC14.34□□□□□ -0.11
Tlr3Q99MB1 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Tlr3Q99MB1 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Tlr3Q99MB1 AC238811.3-201ENSMUST00000225422 709 ntBASIC14.34□□□□□ -0.11
Tlr3Q99MB1 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Tlr3Q99MB1 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC14.34□□□□□ -0.11
Tlr3Q99MB1 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC14.34□□□□□ -0.11
Tlr3Q99MB1 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Tlr3Q99MB1 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Tlr3Q99MB1 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Tlr3Q99MB1 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Tlr3Q99MB1 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Tlr3Q99MB1 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Tlr3Q99MB1 CT025610.1-201ENSMUST00000224552 1786 ntBASIC14.34□□□□□ -0.11
Tlr3Q99MB1 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Tlr3Q99MB1 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Tlr3Q99MB1 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Tlr3Q99MB1 Grk6-205ENSMUST00000224653 2976 ntBASIC14.34□□□□□ -0.11
Tlr3Q99MB1 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Tlr3Q99MB1 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Tlr3Q99MB1 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Tlr3Q99MB1 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Tlr3Q99MB1 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Tlr3Q99MB1 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Tlr3Q99MB1 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Tlr3Q99MB1 Mir874-201ENSMUST00000104769 76 ntBASIC14.33□□□□□ -0.12
Tlr3Q99MB1 Gm15371-201ENSMUST00000117057 784 ntBASIC14.33□□□□□ -0.12
Tlr3Q99MB1 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC14.33□□□□□ -0.12
Tlr3Q99MB1 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Tlr3Q99MB1 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
Tlr3Q99MB1 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Tlr3Q99MB1 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC14.33□□□□□ -0.12
Tlr3Q99MB1 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC14.33□□□□□ -0.12
Tlr3Q99MB1 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC14.33□□□□□ -0.12
Tlr3Q99MB1 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC14.33□□□□□ -0.12
Tlr3Q99MB1 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Tlr3Q99MB1 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Tlr3Q99MB1 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Tlr3Q99MB1 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Tlr3Q99MB1 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Tlr3Q99MB1 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Tlr3Q99MB1 Gm45242-201ENSMUST00000210666 2129 ntBASIC14.33□□□□□ -0.12
Tlr3Q99MB1 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Tlr3Q99MB1 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Tlr3Q99MB1 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Tlr3Q99MB1 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC14.33□□□□□ -0.12
Tlr3Q99MB1 Gm37795-201ENSMUST00000194216 2459 ntBASIC14.33□□□□□ -0.12
Tlr3Q99MB1 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Tlr3Q99MB1 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Tlr3Q99MB1 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Tlr3Q99MB1 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Tlr3Q99MB1 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Tlr3Q99MB1 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Tlr3Q99MB1 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Tlr3Q99MB1 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC14.32□□□□□ -0.12
Tlr3Q99MB1 Ntrk2-209ENSMUST00000225950 2640 ntBASIC14.32□□□□□ -0.12
Tlr3Q99MB1 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC14.32□□□□□ -0.12
Tlr3Q99MB1 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC14.32□□□□□ -0.12
Tlr3Q99MB1 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC14.32□□□□□ -0.12
Tlr3Q99MB1 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Tlr3Q99MB1 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC14.32□□□□□ -0.12
Tlr3Q99MB1 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Tlr3Q99MB1 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC14.32□□□□□ -0.12
Tlr3Q99MB1 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Tlr3Q99MB1 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC14.32□□□□□ -0.12
Tlr3Q99MB1 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Tlr3Q99MB1 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Tlr3Q99MB1 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Tlr3Q99MB1 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC14.32□□□□□ -0.12
Tlr3Q99MB1 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Tlr3Q99MB1 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC14.32□□□□□ -0.12
Tlr3Q99MB1 Gm18041-201ENSMUST00000218210 618 ntBASIC14.32□□□□□ -0.12
Tlr3Q99MB1 AC159006.1-201ENSMUST00000226396 258 ntBASIC14.32□□□□□ -0.12
Tlr3Q99MB1 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Tlr3Q99MB1 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Tlr3Q99MB1 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Tlr3Q99MB1 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Tlr3Q99MB1 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms