Protein–RNA interactions for Protein: Q91Y10

Pcdhac1, Protocadherin alpha C1, mousemouse

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhac1Q91Y10 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC12.51□□□□□ -0.41
Pcdhac1Q91Y10 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC12.51□□□□□ -0.41
Pcdhac1Q91Y10 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdhac1Q91Y10 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdhac1Q91Y10 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdhac1Q91Y10 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdhac1Q91Y10 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdhac1Q91Y10 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdhac1Q91Y10 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdhac1Q91Y10 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdhac1Q91Y10 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdhac1Q91Y10 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC12.51□□□□□ -0.41
Pcdhac1Q91Y10 AC238940.1-201ENSMUST00000225106 1858 ntBASIC12.51□□□□□ -0.41
Pcdhac1Q91Y10 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdhac1Q91Y10 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Pcdhac1Q91Y10 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Pcdhac1Q91Y10 AC154747.3-201ENSMUST00000224471 3470 ntBASIC12.5□□□□□ -0.41
Pcdhac1Q91Y10 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Pcdhac1Q91Y10 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdhac1Q91Y10 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC12.5□□□□□ -0.41
Pcdhac1Q91Y10 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdhac1Q91Y10 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC12.5□□□□□ -0.41
Pcdhac1Q91Y10 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdhac1Q91Y10 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC12.5□□□□□ -0.41
Pcdhac1Q91Y10 Gm4875-201ENSMUST00000118257 786 ntBASIC12.5□□□□□ -0.41
Pcdhac1Q91Y10 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC12.5□□□□□ -0.41
Pcdhac1Q91Y10 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC12.5□□□□□ -0.41
Pcdhac1Q91Y10 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdhac1Q91Y10 Gm18934-201ENSMUST00000216671 1044 ntBASIC12.5□□□□□ -0.41
Pcdhac1Q91Y10 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC12.5□□□□□ -0.41
Pcdhac1Q91Y10 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Pcdhac1Q91Y10 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdhac1Q91Y10 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdhac1Q91Y10 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdhac1Q91Y10 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdhac1Q91Y10 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdhac1Q91Y10 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Pcdhac1Q91Y10 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdhac1Q91Y10 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdhac1Q91Y10 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdhac1Q91Y10 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdhac1Q91Y10 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Pcdhac1Q91Y10 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdhac1Q91Y10 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Pcdhac1Q91Y10 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdhac1Q91Y10 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC12.5□□□□□ -0.41
Pcdhac1Q91Y10 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC12.5□□□□□ -0.41
Pcdhac1Q91Y10 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdhac1Q91Y10 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Pcdhac1Q91Y10 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdhac1Q91Y10 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdhac1Q91Y10 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdhac1Q91Y10 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdhac1Q91Y10 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdhac1Q91Y10 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdhac1Q91Y10 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdhac1Q91Y10 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
Pcdhac1Q91Y10 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdhac1Q91Y10 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdhac1Q91Y10 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdhac1Q91Y10 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Pcdhac1Q91Y10 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC12.49□□□□□ -0.41
Pcdhac1Q91Y10 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdhac1Q91Y10 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC12.49□□□□□ -0.41
Pcdhac1Q91Y10 Gm42829-201ENSMUST00000198417 2585 ntBASIC12.49□□□□□ -0.41
Pcdhac1Q91Y10 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdhac1Q91Y10 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Pcdhac1Q91Y10 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdhac1Q91Y10 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdhac1Q91Y10 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdhac1Q91Y10 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdhac1Q91Y10 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdhac1Q91Y10 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdhac1Q91Y10 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdhac1Q91Y10 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdhac1Q91Y10 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdhac1Q91Y10 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdhac1Q91Y10 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdhac1Q91Y10 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC12.49□□□□□ -0.41
Pcdhac1Q91Y10 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdhac1Q91Y10 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdhac1Q91Y10 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdhac1Q91Y10 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdhac1Q91Y10 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC12.49□□□□□ -0.41
Pcdhac1Q91Y10 Gm11557-201ENSMUST00000120200 1008 ntBASIC12.49□□□□□ -0.41
Pcdhac1Q91Y10 Gm12151-201ENSMUST00000121374 290 ntBASIC12.49□□□□□ -0.41
Pcdhac1Q91Y10 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdhac1Q91Y10 Gm8927-201ENSMUST00000181978 981 ntBASIC12.49□□□□□ -0.41
Pcdhac1Q91Y10 Gm27838-201ENSMUST00000184829 128 ntBASIC12.49□□□□□ -0.41
Pcdhac1Q91Y10 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Pcdhac1Q91Y10 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
Pcdhac1Q91Y10 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC12.49□□□□□ -0.41
Pcdhac1Q91Y10 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC12.49□□□□□ -0.41
Pcdhac1Q91Y10 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdhac1Q91Y10 Gm3222-201ENSMUST00000071282 990 ntBASIC12.49□□□□□ -0.41
Pcdhac1Q91Y10 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdhac1Q91Y10 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdhac1Q91Y10 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC12.49□□□□□ -0.41
Pcdhac1Q91Y10 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC12.49□□□□□ -0.41
Pcdhac1Q91Y10 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 80.3 ms