Protein–RNA interactions for Protein: Q91XY2

Pcdhga6, Protocadherin gamma A6, mousemouse

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga6Q91XY2 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdhga6Q91XY2 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdhga6Q91XY2 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC13.33□□□□□ -0.28
Pcdhga6Q91XY2 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdhga6Q91XY2 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdhga6Q91XY2 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdhga6Q91XY2 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdhga6Q91XY2 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Pcdhga6Q91XY2 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdhga6Q91XY2 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC13.33□□□□□ -0.28
Pcdhga6Q91XY2 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdhga6Q91XY2 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC13.33□□□□□ -0.28
Pcdhga6Q91XY2 Gm6152-201ENSMUST00000151704 340 ntBASIC13.33□□□□□ -0.28
Pcdhga6Q91XY2 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
Pcdhga6Q91XY2 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC13.33□□□□□ -0.28
Pcdhga6Q91XY2 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC13.33□□□□□ -0.28
Pcdhga6Q91XY2 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdhga6Q91XY2 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdhga6Q91XY2 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC13.33□□□□□ -0.28
Pcdhga6Q91XY2 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Pcdhga6Q91XY2 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdhga6Q91XY2 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdhga6Q91XY2 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC13.33□□□□□ -0.28
Pcdhga6Q91XY2 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdhga6Q91XY2 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdhga6Q91XY2 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdhga6Q91XY2 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdhga6Q91XY2 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdhga6Q91XY2 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC13.33□□□□□ -0.28
Pcdhga6Q91XY2 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdhga6Q91XY2 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC13.33□□□□□ -0.28
Pcdhga6Q91XY2 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdhga6Q91XY2 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdhga6Q91XY2 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdhga6Q91XY2 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC13.33□□□□□ -0.28
Pcdhga6Q91XY2 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdhga6Q91XY2 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdhga6Q91XY2 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdhga6Q91XY2 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdhga6Q91XY2 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdhga6Q91XY2 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdhga6Q91XY2 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdhga6Q91XY2 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdhga6Q91XY2 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdhga6Q91XY2 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdhga6Q91XY2 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdhga6Q91XY2 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdhga6Q91XY2 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdhga6Q91XY2 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdhga6Q91XY2 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdhga6Q91XY2 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC13.32□□□□□ -0.28
Pcdhga6Q91XY2 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC13.32□□□□□ -0.28
Pcdhga6Q91XY2 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC13.32□□□□□ -0.28
Pcdhga6Q91XY2 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdhga6Q91XY2 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdhga6Q91XY2 Gm12241-201ENSMUST00000118330 726 ntBASIC13.32□□□□□ -0.28
Pcdhga6Q91XY2 Gm11557-201ENSMUST00000120200 1008 ntBASIC13.32□□□□□ -0.28
Pcdhga6Q91XY2 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Pcdhga6Q91XY2 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC13.32□□□□□ -0.28
Pcdhga6Q91XY2 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdhga6Q91XY2 Gm8927-201ENSMUST00000181978 981 ntBASIC13.32□□□□□ -0.28
Pcdhga6Q91XY2 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdhga6Q91XY2 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdhga6Q91XY2 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdhga6Q91XY2 Gm3222-201ENSMUST00000071282 990 ntBASIC13.32□□□□□ -0.28
Pcdhga6Q91XY2 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdhga6Q91XY2 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdhga6Q91XY2 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdhga6Q91XY2 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdhga6Q91XY2 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC13.32□□□□□ -0.28
Pcdhga6Q91XY2 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdhga6Q91XY2 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdhga6Q91XY2 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdhga6Q91XY2 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdhga6Q91XY2 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdhga6Q91XY2 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdhga6Q91XY2 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdhga6Q91XY2 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdhga6Q91XY2 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdhga6Q91XY2 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC13.31□□□□□ -0.28
Pcdhga6Q91XY2 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdhga6Q91XY2 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdhga6Q91XY2 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdhga6Q91XY2 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdhga6Q91XY2 Gm22018-201ENSMUST00000104357 131 ntBASIC13.31□□□□□ -0.28
Pcdhga6Q91XY2 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Pcdhga6Q91XY2 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdhga6Q91XY2 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Pcdhga6Q91XY2 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdhga6Q91XY2 Gm27320-201ENSMUST00000184892 109 ntBASIC13.31□□□□□ -0.28
Pcdhga6Q91XY2 4933424G06Rik-204ENSMUST00000208994 1120 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdhga6Q91XY2 Gm45418-202ENSMUST00000210693 649 ntTSL 5 BASIC13.31□□□□□ -0.28
Pcdhga6Q91XY2 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdhga6Q91XY2 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdhga6Q91XY2 AC139350.3-201ENSMUST00000226151 420 ntBASIC13.31□□□□□ -0.28
Pcdhga6Q91XY2 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdhga6Q91XY2 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC13.31□□□□□ -0.28
Pcdhga6Q91XY2 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Pcdhga6Q91XY2 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Pcdhga6Q91XY2 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC13.31□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms