Protein–RNA interactions for Protein: Q91VN6

Ddx41, Probable ATP-dependent RNA helicase DDX41, mousemouse

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx41Q91VN6 Gm5276-201ENSMUST00000196683 1047 ntBASIC15.35■□□□□ 0.05
Ddx41Q91VN6 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Ddx41Q91VN6 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC15.35■□□□□ 0.05
Ddx41Q91VN6 AC154595.3-201ENSMUST00000224579 384 ntBASIC15.35■□□□□ 0.05
Ddx41Q91VN6 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ddx41Q91VN6 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Ddx41Q91VN6 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC15.35■□□□□ 0.05
Ddx41Q91VN6 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Ddx41Q91VN6 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Ddx41Q91VN6 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ddx41Q91VN6 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Ddx41Q91VN6 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ddx41Q91VN6 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ddx41Q91VN6 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC15.35■□□□□ 0.05
Ddx41Q91VN6 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ddx41Q91VN6 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ddx41Q91VN6 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC15.35■□□□□ 0.05
Ddx41Q91VN6 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Ddx41Q91VN6 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC15.35■□□□□ 0.05
Ddx41Q91VN6 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ddx41Q91VN6 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Ddx41Q91VN6 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC15.34■□□□□ 0.05
Ddx41Q91VN6 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ddx41Q91VN6 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ddx41Q91VN6 Gm43677-201ENSMUST00000198098 2378 ntBASIC15.34■□□□□ 0.05
Ddx41Q91VN6 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ddx41Q91VN6 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ddx41Q91VN6 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ddx41Q91VN6 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ddx41Q91VN6 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ddx41Q91VN6 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ddx41Q91VN6 Gm37795-201ENSMUST00000194216 2459 ntBASIC15.34■□□□□ 0.05
Ddx41Q91VN6 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ddx41Q91VN6 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC15.34■□□□□ 0.05
Ddx41Q91VN6 Mup-ps23-201ENSMUST00000118063 630 ntBASIC15.34■□□□□ 0.05
Ddx41Q91VN6 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC15.34■□□□□ 0.05
Ddx41Q91VN6 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Ddx41Q91VN6 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Ddx41Q91VN6 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Ddx41Q91VN6 Gm6983-201ENSMUST00000214912 628 ntBASIC15.34■□□□□ 0.05
Ddx41Q91VN6 AC153962.4-201ENSMUST00000217878 242 ntBASIC15.34■□□□□ 0.05
Ddx41Q91VN6 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC15.34■□□□□ 0.05
Ddx41Q91VN6 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ddx41Q91VN6 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ddx41Q91VN6 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ddx41Q91VN6 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC15.34■□□□□ 0.05
Ddx41Q91VN6 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Ddx41Q91VN6 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Ddx41Q91VN6 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ddx41Q91VN6 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Ddx41Q91VN6 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ddx41Q91VN6 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Ddx41Q91VN6 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ddx41Q91VN6 Gm45743-201ENSMUST00000212701 2795 ntBASIC15.34■□□□□ 0.05
Ddx41Q91VN6 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Ddx41Q91VN6 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC15.34■□□□□ 0.05
Ddx41Q91VN6 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ddx41Q91VN6 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Ddx41Q91VN6 Gm42480-201ENSMUST00000198434 2595 ntBASIC15.33■□□□□ 0.05
Ddx41Q91VN6 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.05
Ddx41Q91VN6 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Ddx41Q91VN6 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC15.33■□□□□ 0.05
Ddx41Q91VN6 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Ddx41Q91VN6 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ddx41Q91VN6 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ddx41Q91VN6 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC15.33■□□□□ 0.04
Ddx41Q91VN6 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Ddx41Q91VN6 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Ddx41Q91VN6 Mir1982-201ENSMUST00000157368 74 ntBASIC15.33■□□□□ 0.04
Ddx41Q91VN6 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Ddx41Q91VN6 Gm8652-201ENSMUST00000181363 964 ntBASIC15.33■□□□□ 0.04
Ddx41Q91VN6 Gm27486-201ENSMUST00000184923 80 ntBASIC15.33■□□□□ 0.04
Ddx41Q91VN6 AY702102-202ENSMUST00000194651 1173 ntBASIC15.33■□□□□ 0.04
Ddx41Q91VN6 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ddx41Q91VN6 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ddx41Q91VN6 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Ddx41Q91VN6 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Ddx41Q91VN6 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Ddx41Q91VN6 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Ddx41Q91VN6 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC15.33■□□□□ 0.04
Ddx41Q91VN6 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Ddx41Q91VN6 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Ddx41Q91VN6 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ddx41Q91VN6 Gm38102-201ENSMUST00000192791 1935 ntBASIC15.33■□□□□ 0.04
Ddx41Q91VN6 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Ddx41Q91VN6 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ddx41Q91VN6 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC15.33■□□□□ 0.04
Ddx41Q91VN6 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ddx41Q91VN6 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ddx41Q91VN6 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Ddx41Q91VN6 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC15.32■□□□□ 0.04
Ddx41Q91VN6 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Ddx41Q91VN6 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC15.32■□□□□ 0.04
Ddx41Q91VN6 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ddx41Q91VN6 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ddx41Q91VN6 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ddx41Q91VN6 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ddx41Q91VN6 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Ddx41Q91VN6 Gm11814-201ENSMUST00000119515 929 ntBASIC15.32■□□□□ 0.04
Ddx41Q91VN6 Gm8584-201ENSMUST00000171982 758 ntBASIC15.32■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms