Protein–RNA interactions for Protein: Q91V10

Vsx1, Visual system homeobox 1, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx1Q91V10 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Vsx1Q91V10 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Vsx1Q91V10 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Vsx1Q91V10 n-R5s195-201ENSMUST00000082891 119 ntBASIC13.18□□□□□ -0.3
Vsx1Q91V10 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Vsx1Q91V10 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Vsx1Q91V10 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Vsx1Q91V10 Gm18244-201ENSMUST00000219747 1566 ntBASIC13.18□□□□□ -0.3
Vsx1Q91V10 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Vsx1Q91V10 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Vsx1Q91V10 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Vsx1Q91V10 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Vsx1Q91V10 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Vsx1Q91V10 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC13.18□□□□□ -0.3
Vsx1Q91V10 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Vsx1Q91V10 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Vsx1Q91V10 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Vsx1Q91V10 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Vsx1Q91V10 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Vsx1Q91V10 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Vsx1Q91V10 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Vsx1Q91V10 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Vsx1Q91V10 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Vsx1Q91V10 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vsx1Q91V10 AC115735.4-201ENSMUST00000227460 1944 ntBASIC13.17□□□□□ -0.3
Vsx1Q91V10 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vsx1Q91V10 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vsx1Q91V10 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC13.17□□□□□ -0.3
Vsx1Q91V10 Gm43579-201ENSMUST00000202387 1307 ntBASIC13.17□□□□□ -0.3
Vsx1Q91V10 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC13.17□□□□□ -0.3
Vsx1Q91V10 Gm9333-201ENSMUST00000205452 1323 ntBASIC13.17□□□□□ -0.3
Vsx1Q91V10 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vsx1Q91V10 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Vsx1Q91V10 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vsx1Q91V10 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Vsx1Q91V10 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vsx1Q91V10 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vsx1Q91V10 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC13.17□□□□□ -0.3
Vsx1Q91V10 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Vsx1Q91V10 Gm11618-201ENSMUST00000117946 267 ntBASIC13.17□□□□□ -0.3
Vsx1Q91V10 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC13.17□□□□□ -0.3
Vsx1Q91V10 Gm11591-201ENSMUST00000120063 702 ntBASIC13.17□□□□□ -0.3
Vsx1Q91V10 B9d1os-201ENSMUST00000137010 674 ntBASIC13.17□□□□□ -0.3
Vsx1Q91V10 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vsx1Q91V10 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC13.17□□□□□ -0.3
Vsx1Q91V10 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC13.17□□□□□ -0.3
Vsx1Q91V10 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC13.17□□□□□ -0.3
Vsx1Q91V10 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC13.17□□□□□ -0.3
Vsx1Q91V10 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC13.17□□□□□ -0.3
Vsx1Q91V10 AC122371.3-201ENSMUST00000223402 1061 ntBASIC13.17□□□□□ -0.3
Vsx1Q91V10 CT030704.2-201ENSMUST00000228887 494 ntBASIC13.17□□□□□ -0.3
Vsx1Q91V10 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vsx1Q91V10 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vsx1Q91V10 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vsx1Q91V10 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vsx1Q91V10 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vsx1Q91V10 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Vsx1Q91V10 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vsx1Q91V10 Gm2420-202ENSMUST00000202224 2249 ntBASIC13.17□□□□□ -0.3
Vsx1Q91V10 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Vsx1Q91V10 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Vsx1Q91V10 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC13.17□□□□□ -0.3
Vsx1Q91V10 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Vsx1Q91V10 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vsx1Q91V10 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Vsx1Q91V10 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Vsx1Q91V10 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vsx1Q91V10 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Vsx1Q91V10 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Vsx1Q91V10 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vsx1Q91V10 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Vsx1Q91V10 Pcgf5-211ENSMUST00000225920 6443 ntBASIC13.16□□□□□ -0.3
Vsx1Q91V10 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Vsx1Q91V10 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Vsx1Q91V10 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC13.16□□□□□ -0.3
Vsx1Q91V10 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Vsx1Q91V10 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Vsx1Q91V10 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Vsx1Q91V10 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
Vsx1Q91V10 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Vsx1Q91V10 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Vsx1Q91V10 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Vsx1Q91V10 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Vsx1Q91V10 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Vsx1Q91V10 Gm29741-201ENSMUST00000192667 421 ntBASIC13.16□□□□□ -0.3
Vsx1Q91V10 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Vsx1Q91V10 Gm21769-201ENSMUST00000211922 111 ntBASIC13.16□□□□□ -0.3
Vsx1Q91V10 Gm17870-201ENSMUST00000219489 1174 ntBASIC13.16□□□□□ -0.3
Vsx1Q91V10 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Vsx1Q91V10 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Vsx1Q91V10 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Vsx1Q91V10 Matn2-206ENSMUST00000228570 2798 ntBASIC13.16□□□□□ -0.3
Vsx1Q91V10 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Vsx1Q91V10 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC13.16□□□□□ -0.3
Vsx1Q91V10 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Vsx1Q91V10 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Vsx1Q91V10 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Vsx1Q91V10 Gm45684-201ENSMUST00000210244 1571 ntBASIC13.15□□□□□ -0.3
Vsx1Q91V10 Gm6015-201ENSMUST00000217493 1586 ntBASIC13.15□□□□□ -0.3
Vsx1Q91V10 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms