Protein–RNA interactions for Protein: Q8VI88

Odf4, Outer dense fiber protein 4, mousemouse

Predictions only

Length 290 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Odf4Q8VI88 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Odf4Q8VI88 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Odf4Q8VI88 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Odf4Q8VI88 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Odf4Q8VI88 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Odf4Q8VI88 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Odf4Q8VI88 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Odf4Q8VI88 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Odf4Q8VI88 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC11.99□□□□□ -0.49
Odf4Q8VI88 Gm14042-201ENSMUST00000120139 833 ntBASIC11.99□□□□□ -0.49
Odf4Q8VI88 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC11.99□□□□□ -0.49
Odf4Q8VI88 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC11.99□□□□□ -0.49
Odf4Q8VI88 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Odf4Q8VI88 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Odf4Q8VI88 Hist1h2al-201ENSMUST00000091708 339 ntBASIC11.99□□□□□ -0.49
Odf4Q8VI88 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Odf4Q8VI88 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Odf4Q8VI88 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC11.99□□□□□ -0.49
Odf4Q8VI88 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Odf4Q8VI88 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Odf4Q8VI88 Gm14451-201ENSMUST00000121581 1542 ntBASIC11.99□□□□□ -0.49
Odf4Q8VI88 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Odf4Q8VI88 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC11.99□□□□□ -0.49
Odf4Q8VI88 Ssr1-203ENSMUST00000225246 1825 ntBASIC11.99□□□□□ -0.49
Odf4Q8VI88 Gm38102-201ENSMUST00000192791 1935 ntBASIC11.99□□□□□ -0.49
Odf4Q8VI88 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Odf4Q8VI88 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Odf4Q8VI88 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Odf4Q8VI88 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Odf4Q8VI88 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC11.99□□□□□ -0.49
Odf4Q8VI88 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Odf4Q8VI88 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Odf4Q8VI88 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Odf4Q8VI88 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Odf4Q8VI88 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Odf4Q8VI88 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Odf4Q8VI88 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Odf4Q8VI88 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Odf4Q8VI88 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Odf4Q8VI88 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Odf4Q8VI88 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC11.98□□□□□ -0.49
Odf4Q8VI88 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Odf4Q8VI88 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Odf4Q8VI88 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Odf4Q8VI88 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Odf4Q8VI88 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Odf4Q8VI88 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Odf4Q8VI88 Gm45667-201ENSMUST00000210380 1316 ntBASIC11.98□□□□□ -0.49
Odf4Q8VI88 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC11.98□□□□□ -0.49
Odf4Q8VI88 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC11.98□□□□□ -0.49
Odf4Q8VI88 Gm7820-201ENSMUST00000121012 1052 ntBASIC11.98□□□□□ -0.49
Odf4Q8VI88 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Odf4Q8VI88 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC11.98□□□□□ -0.49
Odf4Q8VI88 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC11.98□□□□□ -0.49
Odf4Q8VI88 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Odf4Q8VI88 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC11.98□□□□□ -0.49
Odf4Q8VI88 Gm37917-201ENSMUST00000194711 392 ntBASIC11.98□□□□□ -0.49
Odf4Q8VI88 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC11.98□□□□□ -0.49
Odf4Q8VI88 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Odf4Q8VI88 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Odf4Q8VI88 Gm6180-201ENSMUST00000065243 498 ntBASIC11.98□□□□□ -0.49
Odf4Q8VI88 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC11.98□□□□□ -0.49
Odf4Q8VI88 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Odf4Q8VI88 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Odf4Q8VI88 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC11.98□□□□□ -0.49
Odf4Q8VI88 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Odf4Q8VI88 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Odf4Q8VI88 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Odf4Q8VI88 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Odf4Q8VI88 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC11.98□□□□□ -0.49
Odf4Q8VI88 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC11.98□□□□□ -0.49
Odf4Q8VI88 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Odf4Q8VI88 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Odf4Q8VI88 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Odf4Q8VI88 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Odf4Q8VI88 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Odf4Q8VI88 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Odf4Q8VI88 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Odf4Q8VI88 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
Odf4Q8VI88 AC238940.1-201ENSMUST00000225106 1858 ntBASIC11.97□□□□□ -0.49
Odf4Q8VI88 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Odf4Q8VI88 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Odf4Q8VI88 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Odf4Q8VI88 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Odf4Q8VI88 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Odf4Q8VI88 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Odf4Q8VI88 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Odf4Q8VI88 Gm38355-201ENSMUST00000192514 1570 ntBASIC11.97□□□□□ -0.49
Odf4Q8VI88 Gm5763-201ENSMUST00000155951 1530 ntBASIC11.97□□□□□ -0.49
Odf4Q8VI88 BC001981-202ENSMUST00000191393 1545 ntBASIC11.97□□□□□ -0.49
Odf4Q8VI88 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Odf4Q8VI88 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Odf4Q8VI88 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC11.97□□□□□ -0.49
Odf4Q8VI88 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Odf4Q8VI88 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Odf4Q8VI88 AC155298.2-201ENSMUST00000225485 6226 ntBASIC11.97□□□□□ -0.49
Odf4Q8VI88 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Odf4Q8VI88 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Odf4Q8VI88 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Odf4Q8VI88 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 38.4 ms