Protein–RNA interactions for Protein: Q8VE18

Smg8, Protein SMG8, mousemouse

Predictions only

Length 991 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smg8Q8VE18 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Smg8Q8VE18 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Smg8Q8VE18 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Smg8Q8VE18 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Smg8Q8VE18 Tmed9-203ENSMUST00000224741 1450 ntBASIC14.21□□□□□ -0.13
Smg8Q8VE18 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Smg8Q8VE18 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Smg8Q8VE18 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Smg8Q8VE18 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC14.21□□□□□ -0.13
Smg8Q8VE18 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC14.21□□□□□ -0.13
Smg8Q8VE18 Gm25927-201ENSMUST00000175058 117 ntBASIC14.21□□□□□ -0.13
Smg8Q8VE18 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC14.21□□□□□ -0.13
Smg8Q8VE18 Gm29019-202ENSMUST00000188623 564 ntTSL 2 BASIC14.21□□□□□ -0.13
Smg8Q8VE18 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC14.21□□□□□ -0.13
Smg8Q8VE18 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Smg8Q8VE18 Gm6013-201ENSMUST00000212264 699 ntBASIC14.21□□□□□ -0.13
Smg8Q8VE18 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC14.21□□□□□ -0.13
Smg8Q8VE18 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Smg8Q8VE18 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Smg8Q8VE18 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Smg8Q8VE18 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Smg8Q8VE18 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Smg8Q8VE18 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Smg8Q8VE18 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Smg8Q8VE18 Gm12626-201ENSMUST00000117339 1983 ntBASIC14.21□□□□□ -0.13
Smg8Q8VE18 Gm12623-201ENSMUST00000119849 1983 ntBASIC14.21□□□□□ -0.13
Smg8Q8VE18 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Smg8Q8VE18 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.13
Smg8Q8VE18 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Smg8Q8VE18 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Smg8Q8VE18 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Smg8Q8VE18 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Smg8Q8VE18 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Smg8Q8VE18 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Smg8Q8VE18 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
Smg8Q8VE18 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Smg8Q8VE18 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Smg8Q8VE18 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Smg8Q8VE18 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Smg8Q8VE18 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Smg8Q8VE18 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
Smg8Q8VE18 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Smg8Q8VE18 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Smg8Q8VE18 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Smg8Q8VE18 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Smg8Q8VE18 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Smg8Q8VE18 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
Smg8Q8VE18 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Smg8Q8VE18 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Smg8Q8VE18 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Smg8Q8VE18 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Smg8Q8VE18 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Smg8Q8VE18 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Smg8Q8VE18 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Smg8Q8VE18 Mir1247-201ENSMUST00000116706 82 ntBASIC14.2□□□□□ -0.14
Smg8Q8VE18 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC14.2□□□□□ -0.14
Smg8Q8VE18 Gm16479-201ENSMUST00000121706 932 ntBASIC14.2□□□□□ -0.14
Smg8Q8VE18 Gm2231-201ENSMUST00000125661 612 ntBASIC14.2□□□□□ -0.14
Smg8Q8VE18 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC14.2□□□□□ -0.14
Smg8Q8VE18 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC14.2□□□□□ -0.14
Smg8Q8VE18 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Smg8Q8VE18 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC14.2□□□□□ -0.14
Smg8Q8VE18 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC14.2□□□□□ -0.14
Smg8Q8VE18 AC133598.1-201ENSMUST00000224327 660 ntBASIC14.2□□□□□ -0.14
Smg8Q8VE18 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Smg8Q8VE18 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Smg8Q8VE18 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Smg8Q8VE18 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Smg8Q8VE18 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Smg8Q8VE18 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Smg8Q8VE18 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
Smg8Q8VE18 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC14.2□□□□□ -0.14
Smg8Q8VE18 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Smg8Q8VE18 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Smg8Q8VE18 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Smg8Q8VE18 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC14.2□□□□□ -0.14
Smg8Q8VE18 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Smg8Q8VE18 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Smg8Q8VE18 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Smg8Q8VE18 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Smg8Q8VE18 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Smg8Q8VE18 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Smg8Q8VE18 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Smg8Q8VE18 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Smg8Q8VE18 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Smg8Q8VE18 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Smg8Q8VE18 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Smg8Q8VE18 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Smg8Q8VE18 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Smg8Q8VE18 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Smg8Q8VE18 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Smg8Q8VE18 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Smg8Q8VE18 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Smg8Q8VE18 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC14.19□□□□□ -0.14
Smg8Q8VE18 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC14.19□□□□□ -0.14
Smg8Q8VE18 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC14.19□□□□□ -0.14
Smg8Q8VE18 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC14.19□□□□□ -0.14
Smg8Q8VE18 Gm43118-201ENSMUST00000199149 775 ntBASIC14.19□□□□□ -0.14
Smg8Q8VE18 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Smg8Q8VE18 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 54.6 ms