Protein–RNA interactions for Protein: Q8R5L3

Vps39, Vam6/Vps39-like protein, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps39Q8R5L3 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC13.39□□□□□ -0.27
Vps39Q8R5L3 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Vps39Q8R5L3 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC13.39□□□□□ -0.27
Vps39Q8R5L3 AC139580.1-202ENSMUST00000223574 928 ntBASIC13.39□□□□□ -0.27
Vps39Q8R5L3 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Vps39Q8R5L3 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Vps39Q8R5L3 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Vps39Q8R5L3 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Vps39Q8R5L3 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Vps39Q8R5L3 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Vps39Q8R5L3 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Vps39Q8R5L3 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC13.39□□□□□ -0.27
Vps39Q8R5L3 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Vps39Q8R5L3 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Vps39Q8R5L3 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Vps39Q8R5L3 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Vps39Q8R5L3 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Vps39Q8R5L3 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Vps39Q8R5L3 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Vps39Q8R5L3 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Vps39Q8R5L3 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Vps39Q8R5L3 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Vps39Q8R5L3 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Vps39Q8R5L3 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Vps39Q8R5L3 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Vps39Q8R5L3 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC13.38□□□□□ -0.27
Vps39Q8R5L3 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Vps39Q8R5L3 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Vps39Q8R5L3 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Vps39Q8R5L3 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Vps39Q8R5L3 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Vps39Q8R5L3 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC13.38□□□□□ -0.27
Vps39Q8R5L3 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Vps39Q8R5L3 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Vps39Q8R5L3 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC13.38□□□□□ -0.27
Vps39Q8R5L3 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Vps39Q8R5L3 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Vps39Q8R5L3 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Vps39Q8R5L3 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Vps39Q8R5L3 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Vps39Q8R5L3 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Vps39Q8R5L3 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Vps39Q8R5L3 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC13.38□□□□□ -0.27
Vps39Q8R5L3 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC13.38□□□□□ -0.27
Vps39Q8R5L3 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC13.38□□□□□ -0.27
Vps39Q8R5L3 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Vps39Q8R5L3 Mir7684-201ENSMUST00000183858 60 ntBASIC13.38□□□□□ -0.27
Vps39Q8R5L3 Mir8102-201ENSMUST00000184148 139 ntBASIC13.38□□□□□ -0.27
Vps39Q8R5L3 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC13.38□□□□□ -0.27
Vps39Q8R5L3 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Vps39Q8R5L3 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Vps39Q8R5L3 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Vps39Q8R5L3 Gm24447-201ENSMUST00000083977 338 ntBASIC13.38□□□□□ -0.27
Vps39Q8R5L3 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Vps39Q8R5L3 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Vps39Q8R5L3 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Vps39Q8R5L3 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Vps39Q8R5L3 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC13.38□□□□□ -0.27
Vps39Q8R5L3 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Vps39Q8R5L3 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Vps39Q8R5L3 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Vps39Q8R5L3 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Vps39Q8R5L3 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Vps39Q8R5L3 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Vps39Q8R5L3 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Vps39Q8R5L3 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Vps39Q8R5L3 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Vps39Q8R5L3 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Vps39Q8R5L3 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Vps39Q8R5L3 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Vps39Q8R5L3 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Vps39Q8R5L3 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Vps39Q8R5L3 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Vps39Q8R5L3 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Vps39Q8R5L3 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC13.37□□□□□ -0.27
Vps39Q8R5L3 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Vps39Q8R5L3 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC13.37□□□□□ -0.27
Vps39Q8R5L3 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC13.37□□□□□ -0.27
Vps39Q8R5L3 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC13.37□□□□□ -0.27
Vps39Q8R5L3 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC13.37□□□□□ -0.27
Vps39Q8R5L3 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC13.37□□□□□ -0.27
Vps39Q8R5L3 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC13.37□□□□□ -0.27
Vps39Q8R5L3 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC13.37□□□□□ -0.27
Vps39Q8R5L3 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Vps39Q8R5L3 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Vps39Q8R5L3 Gm5161-201ENSMUST00000075243 853 ntBASIC13.37□□□□□ -0.27
Vps39Q8R5L3 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Vps39Q8R5L3 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Vps39Q8R5L3 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Vps39Q8R5L3 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC13.37□□□□□ -0.27
Vps39Q8R5L3 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Vps39Q8R5L3 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Vps39Q8R5L3 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Vps39Q8R5L3 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Vps39Q8R5L3 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Vps39Q8R5L3 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Vps39Q8R5L3 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC13.37□□□□□ -0.27
Vps39Q8R5L3 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Vps39Q8R5L3 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Vps39Q8R5L3 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 89.6 ms