Protein–RNA interactions for Protein: Q8R317

Ubqln1, Ubiquilin-1, mousemouse

Predictions only

Length 582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubqln1Q8R317 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ubqln1Q8R317 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Ubqln1Q8R317 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ubqln1Q8R317 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Ubqln1Q8R317 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ubqln1Q8R317 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ubqln1Q8R317 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Ubqln1Q8R317 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ubqln1Q8R317 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ubqln1Q8R317 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ubqln1Q8R317 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Ubqln1Q8R317 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ubqln1Q8R317 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC12.67□□□□□ -0.38
Ubqln1Q8R317 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Ubqln1Q8R317 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ubqln1Q8R317 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ubqln1Q8R317 Gm12859-201ENSMUST00000117834 427 ntBASIC12.67□□□□□ -0.38
Ubqln1Q8R317 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC12.67□□□□□ -0.38
Ubqln1Q8R317 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC12.67□□□□□ -0.38
Ubqln1Q8R317 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Ubqln1Q8R317 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC12.67□□□□□ -0.38
Ubqln1Q8R317 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ubqln1Q8R317 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Ubqln1Q8R317 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ubqln1Q8R317 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ubqln1Q8R317 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Ubqln1Q8R317 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ubqln1Q8R317 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ubqln1Q8R317 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ubqln1Q8R317 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ubqln1Q8R317 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ubqln1Q8R317 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC12.67□□□□□ -0.38
Ubqln1Q8R317 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Ubqln1Q8R317 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC12.67□□□□□ -0.38
Ubqln1Q8R317 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Ubqln1Q8R317 AC154262.2-201ENSMUST00000224310 2293 ntBASIC12.67□□□□□ -0.38
Ubqln1Q8R317 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Ubqln1Q8R317 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Ubqln1Q8R317 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Ubqln1Q8R317 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Ubqln1Q8R317 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ubqln1Q8R317 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ubqln1Q8R317 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ubqln1Q8R317 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Ubqln1Q8R317 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ubqln1Q8R317 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC12.66□□□□□ -0.38
Ubqln1Q8R317 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Ubqln1Q8R317 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ubqln1Q8R317 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Ubqln1Q8R317 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ubqln1Q8R317 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Ubqln1Q8R317 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ubqln1Q8R317 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Ubqln1Q8R317 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ubqln1Q8R317 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ubqln1Q8R317 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
Ubqln1Q8R317 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ubqln1Q8R317 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ubqln1Q8R317 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ubqln1Q8R317 Gm12537-201ENSMUST00000119266 1002 ntBASIC12.66□□□□□ -0.38
Ubqln1Q8R317 Gm12070-201ENSMUST00000119551 1002 ntBASIC12.66□□□□□ -0.38
Ubqln1Q8R317 Gm12341-201ENSMUST00000119724 503 ntBASIC12.66□□□□□ -0.38
Ubqln1Q8R317 Gm12671-201ENSMUST00000119978 1002 ntBASIC12.66□□□□□ -0.38
Ubqln1Q8R317 Gm13292-201ENSMUST00000120014 1000 ntBASIC12.66□□□□□ -0.38
Ubqln1Q8R317 Gm12403-201ENSMUST00000121384 959 ntBASIC12.66□□□□□ -0.38
Ubqln1Q8R317 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC12.66□□□□□ -0.38
Ubqln1Q8R317 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Ubqln1Q8R317 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC12.66□□□□□ -0.38
Ubqln1Q8R317 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ubqln1Q8R317 Gm10359-201ENSMUST00000180167 1002 ntBASIC12.66□□□□□ -0.38
Ubqln1Q8R317 Gm12033-201ENSMUST00000180654 1002 ntBASIC12.66□□□□□ -0.38
Ubqln1Q8R317 Gm5559-201ENSMUST00000180755 1002 ntBASIC12.66□□□□□ -0.38
Ubqln1Q8R317 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Ubqln1Q8R317 Gm4335-201ENSMUST00000182581 1004 ntBASIC12.66□□□□□ -0.38
Ubqln1Q8R317 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Ubqln1Q8R317 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC12.66□□□□□ -0.38
Ubqln1Q8R317 AC135669.1-201ENSMUST00000213585 412 ntBASIC12.66□□□□□ -0.38
Ubqln1Q8R317 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ubqln1Q8R317 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC12.66□□□□□ -0.38
Ubqln1Q8R317 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ubqln1Q8R317 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC12.66□□□□□ -0.38
Ubqln1Q8R317 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC12.66□□□□□ -0.38
Ubqln1Q8R317 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ubqln1Q8R317 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Ubqln1Q8R317 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC12.66□□□□□ -0.38
Ubqln1Q8R317 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ubqln1Q8R317 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Ubqln1Q8R317 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC12.66□□□□□ -0.38
Ubqln1Q8R317 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ubqln1Q8R317 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ubqln1Q8R317 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ubqln1Q8R317 Gm14371-201ENSMUST00000138925 1518 ntBASIC12.66□□□□□ -0.38
Ubqln1Q8R317 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ubqln1Q8R317 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC12.66□□□□□ -0.38
Ubqln1Q8R317 Gm38346-201ENSMUST00000192379 2639 ntBASIC12.66□□□□□ -0.38
Ubqln1Q8R317 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ubqln1Q8R317 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Ubqln1Q8R317 Gm44065-201ENSMUST00000203184 3527 ntBASIC12.66□□□□□ -0.38
Ubqln1Q8R317 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Ubqln1Q8R317 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 58.7 ms