Protein–RNA interactions for Protein: Q8CDL9

Ccdc87, Coiled-coil domain-containing protein 87, mousemouse

Predictions only

Length 855 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc87Q8CDL9 AC137842.1-201ENSMUST00000227896 2064 ntBASIC14.19□□□□□ -0.14
Ccdc87Q8CDL9 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ccdc87Q8CDL9 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Ccdc87Q8CDL9 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ccdc87Q8CDL9 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Ccdc87Q8CDL9 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ccdc87Q8CDL9 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ccdc87Q8CDL9 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ccdc87Q8CDL9 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ccdc87Q8CDL9 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Ccdc87Q8CDL9 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC14.19□□□□□ -0.14
Ccdc87Q8CDL9 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Ccdc87Q8CDL9 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Ccdc87Q8CDL9 Mir6977-201ENSMUST00000184960 64 ntBASIC14.19□□□□□ -0.14
Ccdc87Q8CDL9 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC14.19□□□□□ -0.14
Ccdc87Q8CDL9 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC14.19□□□□□ -0.14
Ccdc87Q8CDL9 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Ccdc87Q8CDL9 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ccdc87Q8CDL9 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ccdc87Q8CDL9 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ccdc87Q8CDL9 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ccdc87Q8CDL9 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ccdc87Q8CDL9 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Ccdc87Q8CDL9 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ccdc87Q8CDL9 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Ccdc87Q8CDL9 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC14.19□□□□□ -0.14
Ccdc87Q8CDL9 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Ccdc87Q8CDL9 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Ccdc87Q8CDL9 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ccdc87Q8CDL9 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ccdc87Q8CDL9 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Ccdc87Q8CDL9 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ccdc87Q8CDL9 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ccdc87Q8CDL9 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc87Q8CDL9 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc87Q8CDL9 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc87Q8CDL9 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc87Q8CDL9 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc87Q8CDL9 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc87Q8CDL9 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc87Q8CDL9 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc87Q8CDL9 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC14.18□□□□□ -0.14
Ccdc87Q8CDL9 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc87Q8CDL9 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc87Q8CDL9 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Ccdc87Q8CDL9 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc87Q8CDL9 Mir874-201ENSMUST00000104769 76 ntBASIC14.18□□□□□ -0.14
Ccdc87Q8CDL9 Gm12428-201ENSMUST00000119844 727 ntBASIC14.18□□□□□ -0.14
Ccdc87Q8CDL9 Cd63-ps-201ENSMUST00000145417 875 ntBASIC14.18□□□□□ -0.14
Ccdc87Q8CDL9 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC14.18□□□□□ -0.14
Ccdc87Q8CDL9 Gm5626-201ENSMUST00000222151 1058 ntBASIC14.18□□□□□ -0.14
Ccdc87Q8CDL9 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc87Q8CDL9 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc87Q8CDL9 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Ccdc87Q8CDL9 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc87Q8CDL9 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc87Q8CDL9 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc87Q8CDL9 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Ccdc87Q8CDL9 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc87Q8CDL9 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc87Q8CDL9 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc87Q8CDL9 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc87Q8CDL9 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC14.17□□□□□ -0.14
Ccdc87Q8CDL9 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC14.17□□□□□ -0.14
Ccdc87Q8CDL9 AC116503.1-201ENSMUST00000215445 2192 ntBASIC14.17□□□□□ -0.14
Ccdc87Q8CDL9 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc87Q8CDL9 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Ccdc87Q8CDL9 Gm15459-201ENSMUST00000117405 1941 ntBASIC14.17□□□□□ -0.14
Ccdc87Q8CDL9 Gm8355-201ENSMUST00000177767 1941 ntBASIC14.17□□□□□ -0.14
Ccdc87Q8CDL9 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Ccdc87Q8CDL9 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
Ccdc87Q8CDL9 AC122314.1-201ENSMUST00000223056 2239 ntBASIC14.17□□□□□ -0.14
Ccdc87Q8CDL9 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc87Q8CDL9 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC14.17□□□□□ -0.14
Ccdc87Q8CDL9 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC14.17□□□□□ -0.14
Ccdc87Q8CDL9 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC14.17□□□□□ -0.14
Ccdc87Q8CDL9 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc87Q8CDL9 AC125206.2-201ENSMUST00000217454 574 ntBASIC14.17□□□□□ -0.14
Ccdc87Q8CDL9 Gm9229-201ENSMUST00000222777 126 ntBASIC14.17□□□□□ -0.14
Ccdc87Q8CDL9 Wdyhv1-203ENSMUST00000226889 394 ntBASIC14.17□□□□□ -0.14
Ccdc87Q8CDL9 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc87Q8CDL9 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC14.17□□□□□ -0.14
Ccdc87Q8CDL9 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc87Q8CDL9 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc87Q8CDL9 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
Ccdc87Q8CDL9 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc87Q8CDL9 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc87Q8CDL9 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc87Q8CDL9 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc87Q8CDL9 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc87Q8CDL9 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc87Q8CDL9 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Ccdc87Q8CDL9 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Ccdc87Q8CDL9 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc87Q8CDL9 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Ccdc87Q8CDL9 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc87Q8CDL9 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Ccdc87Q8CDL9 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc87Q8CDL9 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc87Q8CDL9 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms