Protein–RNA interactions for Protein: Q8C8B0

Alx1, ALX homeobox protein 1, mousemouse

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx1Q8C8B0 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC15.54■□□□□ 0.08
Alx1Q8C8B0 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC15.54■□□□□ 0.08
Alx1Q8C8B0 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Alx1Q8C8B0 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Alx1Q8C8B0 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Alx1Q8C8B0 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Alx1Q8C8B0 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Alx1Q8C8B0 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Alx1Q8C8B0 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC15.54■□□□□ 0.08
Alx1Q8C8B0 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC15.54■□□□□ 0.08
Alx1Q8C8B0 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC15.53■□□□□ 0.08
Alx1Q8C8B0 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Alx1Q8C8B0 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Alx1Q8C8B0 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC15.53■□□□□ 0.08
Alx1Q8C8B0 Gm38049-201ENSMUST00000195698 1372 ntBASIC15.53■□□□□ 0.08
Alx1Q8C8B0 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Alx1Q8C8B0 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Alx1Q8C8B0 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Alx1Q8C8B0 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Alx1Q8C8B0 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC15.53■□□□□ 0.08
Alx1Q8C8B0 Gm11637-201ENSMUST00000120601 592 ntBASIC15.53■□□□□ 0.08
Alx1Q8C8B0 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC15.53■□□□□ 0.08
Alx1Q8C8B0 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Alx1Q8C8B0 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Alx1Q8C8B0 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC15.53■□□□□ 0.08
Alx1Q8C8B0 Cdk7-205ENSMUST00000225990 1159 ntBASIC15.53■□□□□ 0.08
Alx1Q8C8B0 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Alx1Q8C8B0 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Alx1Q8C8B0 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Alx1Q8C8B0 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC15.53■□□□□ 0.08
Alx1Q8C8B0 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Alx1Q8C8B0 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC15.53■□□□□ 0.08
Alx1Q8C8B0 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Alx1Q8C8B0 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC15.53■□□□□ 0.08
Alx1Q8C8B0 Gm43423-201ENSMUST00000198390 2094 ntBASIC15.53■□□□□ 0.08
Alx1Q8C8B0 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Alx1Q8C8B0 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Alx1Q8C8B0 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Alx1Q8C8B0 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Alx1Q8C8B0 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Alx1Q8C8B0 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Alx1Q8C8B0 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Alx1Q8C8B0 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Alx1Q8C8B0 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Alx1Q8C8B0 Gm7553-201ENSMUST00000185805 1426 ntBASIC15.52■□□□□ 0.08
Alx1Q8C8B0 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Alx1Q8C8B0 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Alx1Q8C8B0 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Alx1Q8C8B0 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Alx1Q8C8B0 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Alx1Q8C8B0 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Alx1Q8C8B0 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Alx1Q8C8B0 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Alx1Q8C8B0 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Alx1Q8C8B0 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Alx1Q8C8B0 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC15.52■□□□□ 0.08
Alx1Q8C8B0 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC15.52■□□□□ 0.08
Alx1Q8C8B0 Gm2231-201ENSMUST00000125661 612 ntBASIC15.52■□□□□ 0.08
Alx1Q8C8B0 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Alx1Q8C8B0 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC15.52■□□□□ 0.08
Alx1Q8C8B0 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
Alx1Q8C8B0 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC15.52■□□□□ 0.08
Alx1Q8C8B0 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC15.52■□□□□ 0.08
Alx1Q8C8B0 AC122459.1-201ENSMUST00000228373 885 ntBASIC15.52■□□□□ 0.08
Alx1Q8C8B0 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
Alx1Q8C8B0 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Alx1Q8C8B0 Gm25857-201ENSMUST00000082788 129 ntBASIC15.52■□□□□ 0.08
Alx1Q8C8B0 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Alx1Q8C8B0 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
Alx1Q8C8B0 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
Alx1Q8C8B0 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Alx1Q8C8B0 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Alx1Q8C8B0 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Alx1Q8C8B0 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Alx1Q8C8B0 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Alx1Q8C8B0 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Alx1Q8C8B0 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Alx1Q8C8B0 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Alx1Q8C8B0 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Alx1Q8C8B0 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Alx1Q8C8B0 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
Alx1Q8C8B0 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Alx1Q8C8B0 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Alx1Q8C8B0 Grk6-205ENSMUST00000224653 2976 ntBASIC15.51■□□□□ 0.07
Alx1Q8C8B0 Gm38346-201ENSMUST00000192379 2639 ntBASIC15.51■□□□□ 0.07
Alx1Q8C8B0 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Alx1Q8C8B0 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Alx1Q8C8B0 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Alx1Q8C8B0 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
Alx1Q8C8B0 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC15.51■□□□□ 0.07
Alx1Q8C8B0 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Alx1Q8C8B0 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Alx1Q8C8B0 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Alx1Q8C8B0 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Alx1Q8C8B0 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Alx1Q8C8B0 AC238940.1-201ENSMUST00000225106 1858 ntBASIC15.51■□□□□ 0.07
Alx1Q8C8B0 Gm13226-201ENSMUST00000117838 404 ntBASIC15.51■□□□□ 0.07
Alx1Q8C8B0 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC15.51■□□□□ 0.07
Alx1Q8C8B0 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC15.51■□□□□ 0.07
Alx1Q8C8B0 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms