Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC13.11□□□□□ -0.31
Pcdh19Q80TF3 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdh19Q80TF3 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdh19Q80TF3 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdh19Q80TF3 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Pcdh19Q80TF3 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdh19Q80TF3 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Pcdh19Q80TF3 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdh19Q80TF3 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdh19Q80TF3 Gm9200-201ENSMUST00000118513 1354 ntBASIC13.1□□□□□ -0.31
Pcdh19Q80TF3 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdh19Q80TF3 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdh19Q80TF3 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdh19Q80TF3 Gm12957-201ENSMUST00000117835 377 ntBASIC13.1□□□□□ -0.31
Pcdh19Q80TF3 Gm12203-201ENSMUST00000118235 598 ntBASIC13.1□□□□□ -0.31
Pcdh19Q80TF3 Gm12384-201ENSMUST00000119228 919 ntBASIC13.1□□□□□ -0.31
Pcdh19Q80TF3 Gm12209-201ENSMUST00000120089 596 ntBASIC13.1□□□□□ -0.31
Pcdh19Q80TF3 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC13.1□□□□□ -0.31
Pcdh19Q80TF3 Gm2639-201ENSMUST00000156881 1297 ntBASIC13.1□□□□□ -0.31
Pcdh19Q80TF3 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC13.1□□□□□ -0.31
Pcdh19Q80TF3 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC13.1□□□□□ -0.31
Pcdh19Q80TF3 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdh19Q80TF3 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdh19Q80TF3 Gm44985-201ENSMUST00000206202 1016 ntBASIC13.1□□□□□ -0.31
Pcdh19Q80TF3 Gm29705-201ENSMUST00000212598 474 ntBASIC13.1□□□□□ -0.31
Pcdh19Q80TF3 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdh19Q80TF3 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdh19Q80TF3 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Pcdh19Q80TF3 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdh19Q80TF3 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdh19Q80TF3 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Pcdh19Q80TF3 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC13.1□□□□□ -0.31
Pcdh19Q80TF3 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Pcdh19Q80TF3 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Pcdh19Q80TF3 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC13.1□□□□□ -0.31
Pcdh19Q80TF3 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdh19Q80TF3 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdh19Q80TF3 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC13.1□□□□□ -0.31
Pcdh19Q80TF3 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdh19Q80TF3 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdh19Q80TF3 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdh19Q80TF3 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdh19Q80TF3 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC13.1□□□□□ -0.31
Pcdh19Q80TF3 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdh19Q80TF3 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdh19Q80TF3 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdh19Q80TF3 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdh19Q80TF3 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdh19Q80TF3 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdh19Q80TF3 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdh19Q80TF3 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdh19Q80TF3 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdh19Q80TF3 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC13.09□□□□□ -0.31
Pcdh19Q80TF3 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdh19Q80TF3 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Pcdh19Q80TF3 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdh19Q80TF3 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC13.09□□□□□ -0.31
Pcdh19Q80TF3 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdh19Q80TF3 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdh19Q80TF3 Gm27331-201ENSMUST00000183705 60 ntBASIC13.09□□□□□ -0.31
Pcdh19Q80TF3 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC13.09□□□□□ -0.31
Pcdh19Q80TF3 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC13.09□□□□□ -0.31
Pcdh19Q80TF3 AC155237.1-201ENSMUST00000226196 1279 ntBASIC13.09□□□□□ -0.31
Pcdh19Q80TF3 AC139350.1-201ENSMUST00000227064 1594 ntBASIC13.09□□□□□ -0.31
Pcdh19Q80TF3 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdh19Q80TF3 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdh19Q80TF3 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdh19Q80TF3 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC13.09□□□□□ -0.31
Pcdh19Q80TF3 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdh19Q80TF3 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdh19Q80TF3 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Pcdh19Q80TF3 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC13.09□□□□□ -0.31
Pcdh19Q80TF3 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdh19Q80TF3 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdh19Q80TF3 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdh19Q80TF3 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdh19Q80TF3 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdh19Q80TF3 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdh19Q80TF3 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdh19Q80TF3 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdh19Q80TF3 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC13.09□□□□□ -0.31
Pcdh19Q80TF3 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdh19Q80TF3 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdh19Q80TF3 Abhd6-203ENSMUST00000225234 1958 ntBASIC13.09□□□□□ -0.31
Pcdh19Q80TF3 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdh19Q80TF3 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.31
Pcdh19Q80TF3 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pcdh19Q80TF3 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pcdh19Q80TF3 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Pcdh19Q80TF3 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC13.08□□□□□ -0.32
Pcdh19Q80TF3 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pcdh19Q80TF3 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pcdh19Q80TF3 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pcdh19Q80TF3 Gm7553-201ENSMUST00000185805 1426 ntBASIC13.08□□□□□ -0.32
Pcdh19Q80TF3 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC13.08□□□□□ -0.32
Pcdh19Q80TF3 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pcdh19Q80TF3 Gm16202-201ENSMUST00000117532 544 ntBASIC13.08□□□□□ -0.32
Pcdh19Q80TF3 Gm11618-201ENSMUST00000117946 267 ntBASIC13.08□□□□□ -0.32
Pcdh19Q80TF3 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pcdh19Q80TF3 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC13.08□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms