Protein–RNA interactions for Protein: Q64347

Clcn1, Chloride channel protein 1, mousemouse

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn1Q64347 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Clcn1Q64347 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC16.91■□□□□ 0.3
Clcn1Q64347 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Clcn1Q64347 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Clcn1Q64347 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC16.91■□□□□ 0.3
Clcn1Q64347 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Clcn1Q64347 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC16.91■□□□□ 0.3
Clcn1Q64347 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Clcn1Q64347 Gm15370-201ENSMUST00000117158 253 ntBASIC16.91■□□□□ 0.3
Clcn1Q64347 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC16.91■□□□□ 0.3
Clcn1Q64347 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC16.91■□□□□ 0.3
Clcn1Q64347 Ighv1-62-201ENSMUST00000193406 350 ntBASIC16.91■□□□□ 0.3
Clcn1Q64347 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Clcn1Q64347 AC093022.1-201ENSMUST00000226949 1072 ntBASIC16.91■□□□□ 0.3
Clcn1Q64347 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Clcn1Q64347 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Clcn1Q64347 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Clcn1Q64347 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Clcn1Q64347 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Clcn1Q64347 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC16.91■□□□□ 0.3
Clcn1Q64347 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC16.91■□□□□ 0.3
Clcn1Q64347 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC16.91■□□□□ 0.3
Clcn1Q64347 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Clcn1Q64347 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Clcn1Q64347 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Clcn1Q64347 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Clcn1Q64347 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Clcn1Q64347 Gm43579-201ENSMUST00000202387 1307 ntBASIC16.91■□□□□ 0.3
Clcn1Q64347 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Clcn1Q64347 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Clcn1Q64347 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Clcn1Q64347 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Clcn1Q64347 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Clcn1Q64347 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Clcn1Q64347 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Clcn1Q64347 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Clcn1Q64347 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Clcn1Q64347 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Clcn1Q64347 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Clcn1Q64347 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Clcn1Q64347 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC16.9■□□□□ 0.3
Clcn1Q64347 Gm11591-201ENSMUST00000120063 702 ntBASIC16.9■□□□□ 0.3
Clcn1Q64347 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Clcn1Q64347 Gm28196-201ENSMUST00000187719 640 ntBASIC16.9■□□□□ 0.3
Clcn1Q64347 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC16.9■□□□□ 0.3
Clcn1Q64347 Gm37466-201ENSMUST00000195692 652 ntBASIC16.9■□□□□ 0.3
Clcn1Q64347 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC16.9■□□□□ 0.3
Clcn1Q64347 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC16.9■□□□□ 0.3
Clcn1Q64347 Gm4935-201ENSMUST00000221316 1198 ntBASIC16.9■□□□□ 0.3
Clcn1Q64347 Ccl25-201ENSMUST00000024004 1058 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Clcn1Q64347 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Clcn1Q64347 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Clcn1Q64347 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Clcn1Q64347 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Clcn1Q64347 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Clcn1Q64347 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Clcn1Q64347 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Clcn1Q64347 Gm7899-201ENSMUST00000192935 1897 ntBASIC16.9■□□□□ 0.3
Clcn1Q64347 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Clcn1Q64347 A530030E21Rik-201ENSMUST00000199551 1310 ntBASIC16.9■□□□□ 0.3
Clcn1Q64347 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC16.9■□□□□ 0.3
Clcn1Q64347 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC16.9■□□□□ 0.3
Clcn1Q64347 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Clcn1Q64347 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
Clcn1Q64347 Gm3756-201ENSMUST00000169182 1355 ntBASIC16.89■□□□□ 0.3
Clcn1Q64347 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Clcn1Q64347 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.3
Clcn1Q64347 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Clcn1Q64347 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Clcn1Q64347 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC16.89■□□□□ 0.29
Clcn1Q64347 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Clcn1Q64347 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Clcn1Q64347 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Clcn1Q64347 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Clcn1Q64347 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Clcn1Q64347 Gm22323-201ENSMUST00000103832 109 ntBASIC16.89■□□□□ 0.29
Clcn1Q64347 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Clcn1Q64347 Gm13786-201ENSMUST00000122371 333 ntBASIC16.89■□□□□ 0.29
Clcn1Q64347 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Clcn1Q64347 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Clcn1Q64347 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Clcn1Q64347 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Clcn1Q64347 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Clcn1Q64347 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Clcn1Q64347 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC16.89■□□□□ 0.29
Clcn1Q64347 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Clcn1Q64347 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Clcn1Q64347 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Clcn1Q64347 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Clcn1Q64347 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Clcn1Q64347 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Clcn1Q64347 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Clcn1Q64347 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
Clcn1Q64347 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Clcn1Q64347 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Clcn1Q64347 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Clcn1Q64347 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC16.88■□□□□ 0.29
Clcn1Q64347 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
Clcn1Q64347 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Clcn1Q64347 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC16.88■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 38.3 ms