Protein–RNA interactions for Protein: Q4VGL6

Rc3h1, Roquin-1, mousemouse

Known RBP Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1Q4VGL6 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rc3h1Q4VGL6 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Rc3h1Q4VGL6 Acot6-202ENSMUST00000222921 3622 ntBASIC15.41■□□□□ 0.06
Rc3h1Q4VGL6 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rc3h1Q4VGL6 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC15.41■□□□□ 0.06
Rc3h1Q4VGL6 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rc3h1Q4VGL6 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rc3h1Q4VGL6 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Rc3h1Q4VGL6 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rc3h1Q4VGL6 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rc3h1Q4VGL6 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Rc3h1Q4VGL6 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Rc3h1Q4VGL6 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rc3h1Q4VGL6 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Rc3h1Q4VGL6 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC15.4■□□□□ 0.06
Rc3h1Q4VGL6 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Rc3h1Q4VGL6 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rc3h1Q4VGL6 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rc3h1Q4VGL6 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC15.4■□□□□ 0.06
Rc3h1Q4VGL6 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rc3h1Q4VGL6 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rc3h1Q4VGL6 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rc3h1Q4VGL6 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rc3h1Q4VGL6 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Rc3h1Q4VGL6 Mir686-201ENSMUST00000102174 109 ntBASIC15.4■□□□□ 0.06
Rc3h1Q4VGL6 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Rc3h1Q4VGL6 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC15.4■□□□□ 0.06
Rc3h1Q4VGL6 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rc3h1Q4VGL6 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Rc3h1Q4VGL6 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC15.4■□□□□ 0.06
Rc3h1Q4VGL6 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rc3h1Q4VGL6 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC15.4■□□□□ 0.06
Rc3h1Q4VGL6 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC15.4■□□□□ 0.06
Rc3h1Q4VGL6 Gm44711-201ENSMUST00000205414 1264 ntBASIC15.4■□□□□ 0.06
Rc3h1Q4VGL6 Gm18054-201ENSMUST00000207539 555 ntBASIC15.4■□□□□ 0.06
Rc3h1Q4VGL6 AC122305.4-201ENSMUST00000216159 1206 ntBASIC15.4■□□□□ 0.06
Rc3h1Q4VGL6 Gm9823-201ENSMUST00000051212 327 ntBASIC15.4■□□□□ 0.06
Rc3h1Q4VGL6 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Rc3h1Q4VGL6 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Rc3h1Q4VGL6 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC15.4■□□□□ 0.06
Rc3h1Q4VGL6 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rc3h1Q4VGL6 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC15.4■□□□□ 0.06
Rc3h1Q4VGL6 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC15.4■□□□□ 0.06
Rc3h1Q4VGL6 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rc3h1Q4VGL6 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rc3h1Q4VGL6 AC154725.1-201ENSMUST00000224826 1961 ntBASIC15.4■□□□□ 0.06
Rc3h1Q4VGL6 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Rc3h1Q4VGL6 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rc3h1Q4VGL6 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rc3h1Q4VGL6 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Rc3h1Q4VGL6 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rc3h1Q4VGL6 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rc3h1Q4VGL6 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Rc3h1Q4VGL6 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rc3h1Q4VGL6 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC15.39■□□□□ 0.05
Rc3h1Q4VGL6 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Rc3h1Q4VGL6 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Rc3h1Q4VGL6 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Rc3h1Q4VGL6 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rc3h1Q4VGL6 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Rc3h1Q4VGL6 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC15.39■□□□□ 0.05
Rc3h1Q4VGL6 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC15.39■□□□□ 0.05
Rc3h1Q4VGL6 Gm26927-201ENSMUST00000182385 965 ntBASIC15.39■□□□□ 0.05
Rc3h1Q4VGL6 Mir6420-201ENSMUST00000185032 102 ntBASIC15.39■□□□□ 0.05
Rc3h1Q4VGL6 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC15.39■□□□□ 0.05
Rc3h1Q4VGL6 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC15.39■□□□□ 0.05
Rc3h1Q4VGL6 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Rc3h1Q4VGL6 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rc3h1Q4VGL6 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Rc3h1Q4VGL6 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rc3h1Q4VGL6 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rc3h1Q4VGL6 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rc3h1Q4VGL6 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rc3h1Q4VGL6 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Rc3h1Q4VGL6 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rc3h1Q4VGL6 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rc3h1Q4VGL6 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Rc3h1Q4VGL6 Gm5620-201ENSMUST00000077991 1348 ntBASIC15.39■□□□□ 0.05
Rc3h1Q4VGL6 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rc3h1Q4VGL6 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rc3h1Q4VGL6 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rc3h1Q4VGL6 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rc3h1Q4VGL6 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rc3h1Q4VGL6 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC15.39■□□□□ 0.05
Rc3h1Q4VGL6 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC15.39■□□□□ 0.05
Rc3h1Q4VGL6 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rc3h1Q4VGL6 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rc3h1Q4VGL6 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rc3h1Q4VGL6 Gm12846-201ENSMUST00000120431 1373 ntBASIC15.38■□□□□ 0.05
Rc3h1Q4VGL6 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Rc3h1Q4VGL6 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Rc3h1Q4VGL6 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rc3h1Q4VGL6 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rc3h1Q4VGL6 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rc3h1Q4VGL6 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rc3h1Q4VGL6 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rc3h1Q4VGL6 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rc3h1Q4VGL6 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rc3h1Q4VGL6 Gm2420-202ENSMUST00000202224 2249 ntBASIC15.38■□□□□ 0.05
Rc3h1Q4VGL6 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 47.1 ms