Protein–RNA interactions for Protein: Q3UNC9

Cks1brt, Cyclin-dependent kinases regulatory subunit, mousemouse

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1brtQ3UNC9 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC9.56□□□□□ -0.88
Cks1brtQ3UNC9 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC9.56□□□□□ -0.88
Cks1brtQ3UNC9 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Cks1brtQ3UNC9 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC9.56□□□□□ -0.88
Cks1brtQ3UNC9 Gm10275-202ENSMUST00000168697 495 ntBASIC9.56□□□□□ -0.88
Cks1brtQ3UNC9 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Cks1brtQ3UNC9 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC9.56□□□□□ -0.88
Cks1brtQ3UNC9 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC9.56□□□□□ -0.88
Cks1brtQ3UNC9 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Cks1brtQ3UNC9 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC9.56□□□□□ -0.88
Cks1brtQ3UNC9 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Cks1brtQ3UNC9 Gm10275-201ENSMUST00000092620 635 ntBASIC9.56□□□□□ -0.88
Cks1brtQ3UNC9 Evi5l-208ENSMUST00000176825 3728 ntAPPRIS ALT2 TSL 5 BASIC9.56□□□□□ -0.88
Cks1brtQ3UNC9 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Cks1brtQ3UNC9 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Cks1brtQ3UNC9 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Cks1brtQ3UNC9 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC9.56□□□□□ -0.88
Cks1brtQ3UNC9 Fam163a-201ENSMUST00000015628 3882 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Cks1brtQ3UNC9 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Cks1brtQ3UNC9 Lypd6-202ENSMUST00000112712 3495 ntAPPRIS P1 TSL 5 BASIC9.56□□□□□ -0.88
Cks1brtQ3UNC9 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Cks1brtQ3UNC9 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Cks1brtQ3UNC9 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC9.56□□□□□ -0.88
Cks1brtQ3UNC9 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Cks1brtQ3UNC9 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC9.56□□□□□ -0.88
Cks1brtQ3UNC9 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC9.56□□□□□ -0.88
Cks1brtQ3UNC9 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC9.56□□□□□ -0.88
Cks1brtQ3UNC9 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Cks1brtQ3UNC9 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Cks1brtQ3UNC9 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Cks1brtQ3UNC9 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC9.56□□□□□ -0.88
Cks1brtQ3UNC9 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Cks1brtQ3UNC9 Gm8668-201ENSMUST00000120559 1447 ntBASIC9.56□□□□□ -0.88
Cks1brtQ3UNC9 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Cks1brtQ3UNC9 Gm26857-201ENSMUST00000181580 3347 ntTSL 5 BASIC9.56□□□□□ -0.88
Cks1brtQ3UNC9 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Cks1brtQ3UNC9 Mbtps1-201ENSMUST00000081381 4195 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Cks1brtQ3UNC9 Eif5a2-201ENSMUST00000060500 5027 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Cks1brtQ3UNC9 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC9.56□□□□□ -0.88
Cks1brtQ3UNC9 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Cks1brtQ3UNC9 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC9.55□□□□□ -0.88
Cks1brtQ3UNC9 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Cks1brtQ3UNC9 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC9.55□□□□□ -0.88
Cks1brtQ3UNC9 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Cks1brtQ3UNC9 Slc45a4-201ENSMUST00000054266 4664 ntAPPRIS ALT2 TSL 5 BASIC9.55□□□□□ -0.88
Cks1brtQ3UNC9 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Cks1brtQ3UNC9 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Cks1brtQ3UNC9 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC9.55□□□□□ -0.88
Cks1brtQ3UNC9 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Cks1brtQ3UNC9 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC9.55□□□□□ -0.88
Cks1brtQ3UNC9 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Cks1brtQ3UNC9 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC9.55□□□□□ -0.88
Cks1brtQ3UNC9 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC9.55□□□□□ -0.88
Cks1brtQ3UNC9 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Cks1brtQ3UNC9 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Cks1brtQ3UNC9 Fn1-203ENSMUST00000186129 7797 ntAPPRIS ALT2 TSL 1 (best) BASIC9.55□□□□□ -0.88
Cks1brtQ3UNC9 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC9.55□□□□□ -0.88
Cks1brtQ3UNC9 Scn8a-203ENSMUST00000108908 7030 ntAPPRIS ALT1 TSL 5 BASIC9.55□□□□□ -0.88
Cks1brtQ3UNC9 Col6a3-201ENSMUST00000056925 10106 ntTSL 5 BASIC9.55□□□□□ -0.88
Cks1brtQ3UNC9 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC9.55□□□□□ -0.88
Cks1brtQ3UNC9 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC9.55□□□□□ -0.88
Cks1brtQ3UNC9 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Cks1brtQ3UNC9 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Cks1brtQ3UNC9 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC9.55□□□□□ -0.88
Cks1brtQ3UNC9 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Cks1brtQ3UNC9 CT030704.2-201ENSMUST00000228887 494 ntBASIC9.55□□□□□ -0.88
Cks1brtQ3UNC9 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Cks1brtQ3UNC9 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Cks1brtQ3UNC9 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Cks1brtQ3UNC9 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC9.55□□□□□ -0.88
Cks1brtQ3UNC9 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Cks1brtQ3UNC9 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC9.55□□□□□ -0.88
Cks1brtQ3UNC9 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC9.55□□□□□ -0.88
Cks1brtQ3UNC9 Pitpnb-204ENSMUST00000200298 2632 ntAPPRIS ALT1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Cks1brtQ3UNC9 Hdac7-201ENSMUST00000079838 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC9.55□□□□□ -0.88
Cks1brtQ3UNC9 Col11a1-201ENSMUST00000092155 7667 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Cks1brtQ3UNC9 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Cks1brtQ3UNC9 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Cks1brtQ3UNC9 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Cks1brtQ3UNC9 C230014O12Rik-201ENSMUST00000134921 2668 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Cks1brtQ3UNC9 AC122314.1-201ENSMUST00000223056 2239 ntBASIC9.55□□□□□ -0.88
Cks1brtQ3UNC9 Vsig10l-201ENSMUST00000107977 3836 ntAPPRIS ALT2 TSL 5 BASIC9.55□□□□□ -0.88
Cks1brtQ3UNC9 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Cks1brtQ3UNC9 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Cks1brtQ3UNC9 Myh9-201ENSMUST00000016771 7433 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Cks1brtQ3UNC9 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Cks1brtQ3UNC9 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Cks1brtQ3UNC9 Mei1-201ENSMUST00000089178 3974 ntAPPRIS ALT2 TSL 5 BASIC9.55□□□□□ -0.88
Cks1brtQ3UNC9 Fam149a-201ENSMUST00000093526 5469 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Cks1brtQ3UNC9 Als2-204ENSMUST00000163058 5379 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Cks1brtQ3UNC9 Gm4782-201ENSMUST00000168705 2046 ntBASIC9.55□□□□□ -0.88
Cks1brtQ3UNC9 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC9.54□□□□□ -0.88
Cks1brtQ3UNC9 Tmem132a-201ENSMUST00000025645 3657 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Cks1brtQ3UNC9 9030624J02Rik-202ENSMUST00000059390 5097 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Cks1brtQ3UNC9 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC9.54□□□□□ -0.88
Cks1brtQ3UNC9 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC9.54□□□□□ -0.88
Cks1brtQ3UNC9 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Cks1brtQ3UNC9 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Cks1brtQ3UNC9 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Cks1brtQ3UNC9 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms