Protein–RNA interactions for Protein: Q3TIR1

Trappc13, Trafficking protein particle complex subunit 13, mousemouse

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trappc13Q3TIR1 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trappc13Q3TIR1 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trappc13Q3TIR1 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trappc13Q3TIR1 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Trappc13Q3TIR1 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trappc13Q3TIR1 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC12.46□□□□□ -0.42
Trappc13Q3TIR1 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.42
Trappc13Q3TIR1 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trappc13Q3TIR1 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC12.45□□□□□ -0.42
Trappc13Q3TIR1 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trappc13Q3TIR1 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC12.45□□□□□ -0.42
Trappc13Q3TIR1 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trappc13Q3TIR1 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC12.45□□□□□ -0.42
Trappc13Q3TIR1 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trappc13Q3TIR1 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trappc13Q3TIR1 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trappc13Q3TIR1 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC12.45□□□□□ -0.42
Trappc13Q3TIR1 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trappc13Q3TIR1 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC12.45□□□□□ -0.42
Trappc13Q3TIR1 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Trappc13Q3TIR1 Mir6956-201ENSMUST00000183598 62 ntBASIC12.45□□□□□ -0.42
Trappc13Q3TIR1 Gm27989-201ENSMUST00000184721 107 ntBASIC12.45□□□□□ -0.42
Trappc13Q3TIR1 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC12.45□□□□□ -0.42
Trappc13Q3TIR1 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Trappc13Q3TIR1 AC159114.1-201ENSMUST00000220349 266 ntBASIC12.45□□□□□ -0.42
Trappc13Q3TIR1 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trappc13Q3TIR1 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trappc13Q3TIR1 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Trappc13Q3TIR1 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trappc13Q3TIR1 Gm42829-201ENSMUST00000198417 2585 ntBASIC12.45□□□□□ -0.42
Trappc13Q3TIR1 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trappc13Q3TIR1 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trappc13Q3TIR1 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trappc13Q3TIR1 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trappc13Q3TIR1 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC12.45□□□□□ -0.42
Trappc13Q3TIR1 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trappc13Q3TIR1 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trappc13Q3TIR1 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trappc13Q3TIR1 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trappc13Q3TIR1 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trappc13Q3TIR1 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC12.44□□□□□ -0.42
Trappc13Q3TIR1 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
Trappc13Q3TIR1 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trappc13Q3TIR1 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trappc13Q3TIR1 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trappc13Q3TIR1 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trappc13Q3TIR1 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trappc13Q3TIR1 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Trappc13Q3TIR1 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trappc13Q3TIR1 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC12.44□□□□□ -0.42
Trappc13Q3TIR1 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trappc13Q3TIR1 Syt7-205ENSMUST00000224135 1557 ntBASIC12.44□□□□□ -0.42
Trappc13Q3TIR1 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Trappc13Q3TIR1 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trappc13Q3TIR1 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trappc13Q3TIR1 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC12.44□□□□□ -0.42
Trappc13Q3TIR1 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trappc13Q3TIR1 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Trappc13Q3TIR1 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Trappc13Q3TIR1 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC12.44□□□□□ -0.42
Trappc13Q3TIR1 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC12.44□□□□□ -0.42
Trappc13Q3TIR1 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC12.44□□□□□ -0.42
Trappc13Q3TIR1 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC12.44□□□□□ -0.42
Trappc13Q3TIR1 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC12.44□□□□□ -0.42
Trappc13Q3TIR1 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trappc13Q3TIR1 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trappc13Q3TIR1 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trappc13Q3TIR1 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC12.44□□□□□ -0.42
Trappc13Q3TIR1 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC12.44□□□□□ -0.42
Trappc13Q3TIR1 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC12.44□□□□□ -0.42
Trappc13Q3TIR1 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trappc13Q3TIR1 AC139580.1-202ENSMUST00000223574 928 ntBASIC12.44□□□□□ -0.42
Trappc13Q3TIR1 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trappc13Q3TIR1 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trappc13Q3TIR1 Gm24447-201ENSMUST00000083977 338 ntBASIC12.44□□□□□ -0.42
Trappc13Q3TIR1 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trappc13Q3TIR1 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trappc13Q3TIR1 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC12.44□□□□□ -0.42
Trappc13Q3TIR1 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC12.44□□□□□ -0.42
Trappc13Q3TIR1 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trappc13Q3TIR1 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trappc13Q3TIR1 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trappc13Q3TIR1 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Trappc13Q3TIR1 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trappc13Q3TIR1 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trappc13Q3TIR1 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC12.43□□□□□ -0.42
Trappc13Q3TIR1 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trappc13Q3TIR1 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC12.43□□□□□ -0.42
Trappc13Q3TIR1 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trappc13Q3TIR1 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC12.43□□□□□ -0.42
Trappc13Q3TIR1 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trappc13Q3TIR1 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trappc13Q3TIR1 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trappc13Q3TIR1 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trappc13Q3TIR1 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trappc13Q3TIR1 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC12.43□□□□□ -0.42
Trappc13Q3TIR1 Gm12485-201ENSMUST00000119641 291 ntBASIC12.43□□□□□ -0.42
Trappc13Q3TIR1 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC12.43□□□□□ -0.42
Trappc13Q3TIR1 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trappc13Q3TIR1 Gm21854-201ENSMUST00000179901 471 ntBASIC12.43□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms