Protein–RNA interactions for Protein: Q07563

Col17a1, Collagen alpha-1(XVII) chain, mousemouse

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1Q07563 Gm11949-201ENSMUST00000117640 372 ntBASIC20■□□□□ 0.79
Col17a1Q07563 Gm5555-201ENSMUST00000120352 1111 ntBASIC20■□□□□ 0.79
Col17a1Q07563 Myl3-202ENSMUST00000124267 575 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
Col17a1Q07563 Gm15569-201ENSMUST00000133675 594 ntTSL 3 BASIC20■□□□□ 0.79
Col17a1Q07563 Gm11205-201ENSMUST00000137738 431 ntTSL 5 BASIC20■□□□□ 0.79
Col17a1Q07563 Gm26368-201ENSMUST00000157826 118 ntBASIC20■□□□□ 0.79
Col17a1Q07563 Gm20414-201ENSMUST00000172918 646 ntBASIC20■□□□□ 0.79
Col17a1Q07563 Gm6408-201ENSMUST00000179032 1171 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
Col17a1Q07563 9930004E17Rik-201ENSMUST00000180031 498 ntBASIC20■□□□□ 0.79
Col17a1Q07563 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC20■□□□□ 0.79
Col17a1Q07563 Gm28529-201ENSMUST00000186159 387 ntTSL 3 BASIC20■□□□□ 0.79
Col17a1Q07563 Gm37458-201ENSMUST00000194055 410 ntBASIC20■□□□□ 0.79
Col17a1Q07563 Gm44507-201ENSMUST00000206249 343 ntTSL 5 BASIC20■□□□□ 0.79
Col17a1Q07563 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC20■□□□□ 0.79
Col17a1Q07563 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Col17a1Q07563 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
Col17a1Q07563 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Col17a1Q07563 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Col17a1Q07563 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Col17a1Q07563 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
Col17a1Q07563 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC20■□□□□ 0.79
Col17a1Q07563 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Col17a1Q07563 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Col17a1Q07563 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
Col17a1Q07563 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
Col17a1Q07563 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
Col17a1Q07563 Gm13916-201ENSMUST00000117368 628 ntBASIC19.99■□□□□ 0.79
Col17a1Q07563 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Col17a1Q07563 Gm23675-201ENSMUST00000157311 125 ntBASIC19.99■□□□□ 0.79
Col17a1Q07563 Ighv1-48-201ENSMUST00000191795 294 ntBASIC19.99■□□□□ 0.79
Col17a1Q07563 Gm36982-201ENSMUST00000193796 1128 ntBASIC19.99■□□□□ 0.79
Col17a1Q07563 Gm19994-201ENSMUST00000217086 586 ntBASIC19.99■□□□□ 0.79
Col17a1Q07563 Gm18636-201ENSMUST00000218846 1066 ntBASIC19.99■□□□□ 0.79
Col17a1Q07563 Tprg-201ENSMUST00000056087 1084 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Col17a1Q07563 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Col17a1Q07563 Ccna1-204ENSMUST00000198320 1564 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Col17a1Q07563 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Col17a1Q07563 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Col17a1Q07563 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
Col17a1Q07563 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Col17a1Q07563 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Col17a1Q07563 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Col17a1Q07563 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Col17a1Q07563 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Col17a1Q07563 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
Col17a1Q07563 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Col17a1Q07563 Gm12453-201ENSMUST00000121981 331 ntBASIC19.99■□□□□ 0.79
Col17a1Q07563 Gm13572-201ENSMUST00000153675 559 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Col17a1Q07563 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC19.99■□□□□ 0.79
Col17a1Q07563 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC19.99■□□□□ 0.79
Col17a1Q07563 Gm27232-201ENSMUST00000184373 597 ntTSL 3 BASIC19.99■□□□□ 0.79
Col17a1Q07563 AC123619.2-202ENSMUST00000225097 1568 ntBASIC19.99■□□□□ 0.79
Col17a1Q07563 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Col17a1Q07563 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Col17a1Q07563 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Col17a1Q07563 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Col17a1Q07563 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Col17a1Q07563 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Col17a1Q07563 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
Col17a1Q07563 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Col17a1Q07563 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
Col17a1Q07563 Tmem62-202ENSMUST00000110686 2417 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Col17a1Q07563 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Col17a1Q07563 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Col17a1Q07563 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC19.98■□□□□ 0.79
Col17a1Q07563 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Col17a1Q07563 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
Col17a1Q07563 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
Col17a1Q07563 Tcea3-201ENSMUST00000102533 1251 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Col17a1Q07563 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Col17a1Q07563 Gm14724-201ENSMUST00000118400 537 ntBASIC19.98■□□□□ 0.79
Col17a1Q07563 Gm7722-201ENSMUST00000120646 741 ntBASIC19.98■□□□□ 0.79
Col17a1Q07563 Gm23045-201ENSMUST00000175041 96 ntBASIC19.98■□□□□ 0.79
Col17a1Q07563 Gm8100-201ENSMUST00000182906 988 ntBASIC19.98■□□□□ 0.79
Col17a1Q07563 Gm9645-201ENSMUST00000197131 792 ntBASIC19.98■□□□□ 0.79
Col17a1Q07563 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC19.98■□□□□ 0.79
Col17a1Q07563 Cdipt-202ENSMUST00000205830 805 ntTSL 2 BASIC19.98■□□□□ 0.79
Col17a1Q07563 4933430L12Rik-201ENSMUST00000206788 1194 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Col17a1Q07563 Gm46224-201ENSMUST00000220221 1242 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Col17a1Q07563 Cxcl1-201ENSMUST00000031327 953 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Col17a1Q07563 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Col17a1Q07563 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC19.98■□□□□ 0.79
Col17a1Q07563 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Col17a1Q07563 Gm43447-201ENSMUST00000198471 1535 ntBASIC19.98■□□□□ 0.79
Col17a1Q07563 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Col17a1Q07563 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Col17a1Q07563 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Col17a1Q07563 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC19.97■□□□□ 0.79
Col17a1Q07563 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Col17a1Q07563 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Col17a1Q07563 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Col17a1Q07563 Cdk2ap1-202ENSMUST00000111472 648 ntAPPRIS ALT1 TSL 5 BASIC19.97■□□□□ 0.79
Col17a1Q07563 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC19.97■□□□□ 0.79
Col17a1Q07563 Ppt1-204ENSMUST00000121870 986 ntTSL 2 BASIC19.97■□□□□ 0.79
Col17a1Q07563 Txnrd2-205ENSMUST00000126778 491 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Col17a1Q07563 Gm3329-201ENSMUST00000159873 556 ntBASIC19.97■□□□□ 0.79
Col17a1Q07563 Gm8723-201ENSMUST00000166076 820 ntBASIC19.97■□□□□ 0.79
Col17a1Q07563 Gm8701-201ENSMUST00000169259 874 ntBASIC19.97■□□□□ 0.79
Col17a1Q07563 Gm8451-201ENSMUST00000170338 447 ntBASIC19.97■□□□□ 0.79
Col17a1Q07563 Gm5870-201ENSMUST00000196461 282 ntBASIC19.97■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms