Protein–RNA interactions for Protein: Q04887

Sox9, Transcription factor SOX-9, mousemouse

Predictions only

Length 507 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox9Q04887 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Sox9Q04887 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Sox9Q04887 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Sox9Q04887 n-R5s77-201ENSMUST00000083757 119 ntBASIC13.77□□□□□ -0.21
Sox9Q04887 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Sox9Q04887 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC13.77□□□□□ -0.21
Sox9Q04887 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Sox9Q04887 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC13.77□□□□□ -0.21
Sox9Q04887 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Sox9Q04887 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Sox9Q04887 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Sox9Q04887 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sox9Q04887 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sox9Q04887 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC13.76□□□□□ -0.21
Sox9Q04887 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Sox9Q04887 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sox9Q04887 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sox9Q04887 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Sox9Q04887 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sox9Q04887 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sox9Q04887 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sox9Q04887 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sox9Q04887 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Sox9Q04887 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sox9Q04887 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC13.76□□□□□ -0.21
Sox9Q04887 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sox9Q04887 Gm13813-201ENSMUST00000120998 787 ntBASIC13.76□□□□□ -0.21
Sox9Q04887 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Sox9Q04887 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Sox9Q04887 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC13.76□□□□□ -0.21
Sox9Q04887 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Sox9Q04887 Gm26361-201ENSMUST00000158868 186 ntBASIC13.76□□□□□ -0.21
Sox9Q04887 Mocs2-203ENSMUST00000164737 745 ntTSL 3 BASIC13.76□□□□□ -0.21
Sox9Q04887 Gm3625-201ENSMUST00000170816 102 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Sox9Q04887 3300002P13Rik-201ENSMUST00000204020 1092 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Sox9Q04887 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sox9Q04887 Gm8385-201ENSMUST00000058999 643 ntBASIC13.76□□□□□ -0.21
Sox9Q04887 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC13.76□□□□□ -0.21
Sox9Q04887 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sox9Q04887 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sox9Q04887 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sox9Q04887 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC13.76□□□□□ -0.21
Sox9Q04887 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sox9Q04887 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sox9Q04887 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sox9Q04887 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sox9Q04887 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Sox9Q04887 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sox9Q04887 AC148324.1-201ENSMUST00000219034 4240 ntBASIC13.75□□□□□ -0.21
Sox9Q04887 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
Sox9Q04887 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
Sox9Q04887 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC13.75□□□□□ -0.21
Sox9Q04887 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Sox9Q04887 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Sox9Q04887 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC13.75□□□□□ -0.21
Sox9Q04887 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Sox9Q04887 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Sox9Q04887 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Sox9Q04887 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC13.75□□□□□ -0.21
Sox9Q04887 Gltp-202ENSMUST00000112212 799 ntTSL 5 BASIC13.75□□□□□ -0.21
Sox9Q04887 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Sox9Q04887 Gm14665-201ENSMUST00000122294 557 ntBASIC13.75□□□□□ -0.21
Sox9Q04887 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC13.75□□□□□ -0.21
Sox9Q04887 Gm43058-201ENSMUST00000197645 625 ntBASIC13.75□□□□□ -0.21
Sox9Q04887 Gm44545-201ENSMUST00000208262 746 ntBASIC13.75□□□□□ -0.21
Sox9Q04887 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
Sox9Q04887 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Sox9Q04887 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Sox9Q04887 Prr15l-202ENSMUST00000062172 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Sox9Q04887 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Sox9Q04887 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Sox9Q04887 Gm37728-201ENSMUST00000195025 2292 ntBASIC13.75□□□□□ -0.21
Sox9Q04887 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC13.75□□□□□ -0.21
Sox9Q04887 Zkscan14-203ENSMUST00000198959 2243 ntBASIC13.75□□□□□ -0.21
Sox9Q04887 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Sox9Q04887 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Sox9Q04887 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Sox9Q04887 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Sox9Q04887 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC13.75□□□□□ -0.21
Sox9Q04887 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Sox9Q04887 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Sox9Q04887 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Sox9Q04887 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Sox9Q04887 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Sox9Q04887 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Sox9Q04887 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC13.75□□□□□ -0.21
Sox9Q04887 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Sox9Q04887 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Sox9Q04887 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Sox9Q04887 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Sox9Q04887 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Sox9Q04887 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Sox9Q04887 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Sox9Q04887 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Sox9Q04887 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Sox9Q04887 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC13.74□□□□□ -0.21
Sox9Q04887 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Sox9Q04887 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC13.74□□□□□ -0.21
Sox9Q04887 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
Sox9Q04887 Crry-ps-201ENSMUST00000079090 1309 ntBASIC13.74□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms