Protein–RNA interactions for Protein: P70390

Shox2, Short stature homeobox protein 2, mousemouse

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shox2P70390 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Shox2P70390 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Shox2P70390 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Shox2P70390 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Shox2P70390 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Shox2P70390 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Shox2P70390 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Shox2P70390 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Shox2P70390 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Shox2P70390 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Shox2P70390 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Shox2P70390 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Shox2P70390 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Shox2P70390 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Shox2P70390 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Shox2P70390 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Shox2P70390 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Shox2P70390 Pop4-201ENSMUST00000032585 2113 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Shox2P70390 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Shox2P70390 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Shox2P70390 Gm37472-201ENSMUST00000192342 4052 ntBASIC13.18□□□□□ -0.3
Shox2P70390 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Shox2P70390 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Shox2P70390 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC13.17□□□□□ -0.3
Shox2P70390 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Shox2P70390 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Shox2P70390 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC13.17□□□□□ -0.3
Shox2P70390 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC13.17□□□□□ -0.3
Shox2P70390 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Shox2P70390 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Shox2P70390 Pcgf5-211ENSMUST00000225920 6443 ntBASIC13.17□□□□□ -0.3
Shox2P70390 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC13.17□□□□□ -0.3
Shox2P70390 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC13.17□□□□□ -0.3
Shox2P70390 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Shox2P70390 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC13.17□□□□□ -0.3
Shox2P70390 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC13.17□□□□□ -0.3
Shox2P70390 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Shox2P70390 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Shox2P70390 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC13.17□□□□□ -0.3
Shox2P70390 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Shox2P70390 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Shox2P70390 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Shox2P70390 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Shox2P70390 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Shox2P70390 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Shox2P70390 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Shox2P70390 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Shox2P70390 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Shox2P70390 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Shox2P70390 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Shox2P70390 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC13.16□□□□□ -0.3
Shox2P70390 Gm42840-201ENSMUST00000200303 2251 ntBASIC13.16□□□□□ -0.3
Shox2P70390 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Shox2P70390 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Shox2P70390 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Shox2P70390 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Shox2P70390 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Shox2P70390 Arhgef3-204ENSMUST00000225949 3198 ntBASIC13.16□□□□□ -0.3
Shox2P70390 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC13.16□□□□□ -0.3
Shox2P70390 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Shox2P70390 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Shox2P70390 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC13.16□□□□□ -0.3
Shox2P70390 Gm44086-201ENSMUST00000203251 2349 ntBASIC13.16□□□□□ -0.3
Shox2P70390 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Shox2P70390 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Shox2P70390 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Shox2P70390 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Shox2P70390 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Shox2P70390 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC13.16□□□□□ -0.3
Shox2P70390 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
Shox2P70390 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
Shox2P70390 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Shox2P70390 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Shox2P70390 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC13.16□□□□□ -0.3
Shox2P70390 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Shox2P70390 Gm18737-201ENSMUST00000173594 937 ntBASIC13.16□□□□□ -0.3
Shox2P70390 Gm27631-201ENSMUST00000184163 466 ntBASIC13.16□□□□□ -0.3
Shox2P70390 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC13.16□□□□□ -0.3
Shox2P70390 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC13.16□□□□□ -0.3
Shox2P70390 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Shox2P70390 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC13.16□□□□□ -0.3
Shox2P70390 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Shox2P70390 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Shox2P70390 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC13.16□□□□□ -0.3
Shox2P70390 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC13.16□□□□□ -0.3
Shox2P70390 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Shox2P70390 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC13.16□□□□□ -0.3
Shox2P70390 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Shox2P70390 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Shox2P70390 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Shox2P70390 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Shox2P70390 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Shox2P70390 Gm43727-201ENSMUST00000198021 2647 ntBASIC13.16□□□□□ -0.3
Shox2P70390 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Shox2P70390 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC13.16□□□□□ -0.3
Shox2P70390 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Shox2P70390 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Shox2P70390 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC13.16□□□□□ -0.3
Shox2P70390 Gm9025-201ENSMUST00000122415 1575 ntBASIC13.15□□□□□ -0.3
Shox2P70390 AC113060.1-201ENSMUST00000225689 1573 ntBASIC13.15□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 46.8 ms