Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Hmgb1P63158 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Hmgb1P63158 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Hmgb1P63158 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC14.73□□□□□ -0.05
Hmgb1P63158 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Hmgb1P63158 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Hmgb1P63158 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Hmgb1P63158 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Hmgb1P63158 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
Hmgb1P63158 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
Hmgb1P63158 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Hmgb1P63158 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Hmgb1P63158 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Hmgb1P63158 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Hmgb1P63158 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Hmgb1P63158 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Hmgb1P63158 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Hmgb1P63158 Gm43423-201ENSMUST00000198390 2094 ntBASIC14.73□□□□□ -0.05
Hmgb1P63158 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Hmgb1P63158 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Hmgb1P63158 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC14.73□□□□□ -0.05
Hmgb1P63158 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Hmgb1P63158 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC14.73□□□□□ -0.05
Hmgb1P63158 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Hmgb1P63158 Gm43273-201ENSMUST00000199649 2594 ntBASIC14.73□□□□□ -0.05
Hmgb1P63158 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Hmgb1P63158 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC14.73□□□□□ -0.05
Hmgb1P63158 Gm28719-201ENSMUST00000187779 1757 ntBASIC14.73□□□□□ -0.05
Hmgb1P63158 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Hmgb1P63158 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
Hmgb1P63158 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
Hmgb1P63158 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Hmgb1P63158 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Hmgb1P63158 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Hmgb1P63158 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC14.72□□□□□ -0.05
Hmgb1P63158 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Hmgb1P63158 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Hmgb1P63158 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Hmgb1P63158 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Hmgb1P63158 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Hmgb1P63158 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Hmgb1P63158 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Hmgb1P63158 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Hmgb1P63158 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Hmgb1P63158 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Hmgb1P63158 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Hmgb1P63158 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Hmgb1P63158 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Hmgb1P63158 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Hmgb1P63158 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Hmgb1P63158 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC14.72□□□□□ -0.05
Hmgb1P63158 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Hmgb1P63158 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Hmgb1P63158 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC14.72□□□□□ -0.05
Hmgb1P63158 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Hmgb1P63158 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Hmgb1P63158 Gm5161-201ENSMUST00000075243 853 ntBASIC14.72□□□□□ -0.05
Hmgb1P63158 Gm45532-201ENSMUST00000210342 3620 ntBASIC14.72□□□□□ -0.05
Hmgb1P63158 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Hmgb1P63158 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Hmgb1P63158 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Hmgb1P63158 Sox5os1-201ENSMUST00000156994 1585 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Hmgb1P63158 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Hmgb1P63158 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Hmgb1P63158 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC14.72□□□□□ -0.05
Hmgb1P63158 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Hmgb1P63158 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Hmgb1P63158 E030026E10Rik-201ENSMUST00000200395 2217 ntBASIC14.72□□□□□ -0.05
Hmgb1P63158 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC14.72□□□□□ -0.05
Hmgb1P63158 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Hmgb1P63158 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Hmgb1P63158 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Hmgb1P63158 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC14.71□□□□□ -0.05
Hmgb1P63158 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Hmgb1P63158 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Hmgb1P63158 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Hmgb1P63158 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
Hmgb1P63158 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Hmgb1P63158 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
Hmgb1P63158 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Hmgb1P63158 Gm9522-201ENSMUST00000182394 926 ntBASIC14.71□□□□□ -0.05
Hmgb1P63158 Mir7221-201ENSMUST00000184009 72 ntBASIC14.71□□□□□ -0.05
Hmgb1P63158 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Hmgb1P63158 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC14.71□□□□□ -0.05
Hmgb1P63158 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC14.71□□□□□ -0.05
Hmgb1P63158 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Hmgb1P63158 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Hmgb1P63158 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC14.71□□□□□ -0.06
Hmgb1P63158 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC14.71□□□□□ -0.06
Hmgb1P63158 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Hmgb1P63158 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Hmgb1P63158 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Hmgb1P63158 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC14.7□□□□□ -0.06
Hmgb1P63158 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC14.7□□□□□ -0.06
Hmgb1P63158 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
Hmgb1P63158 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Hmgb1P63158 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Hmgb1P63158 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Hmgb1P63158 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
Hmgb1P63158 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 66.4 ms