Protein–RNA interactions for Protein: P59240

Nphp4, Nephrocystin-4, mousemouse

Predictions only

Length 1,425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nphp4P59240 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Nphp4P59240 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Nphp4P59240 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Nphp4P59240 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Nphp4P59240 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Nphp4P59240 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Nphp4P59240 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Nphp4P59240 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Nphp4P59240 Gm8798-201ENSMUST00000211877 1661 ntBASIC17.88■□□□□ 0.45
Nphp4P59240 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Nphp4P59240 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC17.88■□□□□ 0.45
Nphp4P59240 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Nphp4P59240 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Nphp4P59240 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Nphp4P59240 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Nphp4P59240 Gm16296-201ENSMUST00000159905 325 ntBASIC17.88■□□□□ 0.45
Nphp4P59240 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Nphp4P59240 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Nphp4P59240 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC17.88■□□□□ 0.45
Nphp4P59240 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Nphp4P59240 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
Nphp4P59240 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC17.87■□□□□ 0.45
Nphp4P59240 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Nphp4P59240 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Nphp4P59240 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Nphp4P59240 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Nphp4P59240 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Nphp4P59240 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Nphp4P59240 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Nphp4P59240 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
Nphp4P59240 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Nphp4P59240 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Nphp4P59240 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Nphp4P59240 Gm43399-201ENSMUST00000202546 2374 ntBASIC17.87■□□□□ 0.45
Nphp4P59240 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Nphp4P59240 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Nphp4P59240 Gm11531-201ENSMUST00000117614 555 ntBASIC17.87■□□□□ 0.45
Nphp4P59240 Gm12749-201ENSMUST00000122138 1159 ntBASIC17.87■□□□□ 0.45
Nphp4P59240 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC17.87■□□□□ 0.45
Nphp4P59240 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC17.87■□□□□ 0.45
Nphp4P59240 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Nphp4P59240 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
Nphp4P59240 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Nphp4P59240 CT025533.2-201ENSMUST00000228715 1248 ntBASIC17.87■□□□□ 0.45
Nphp4P59240 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
Nphp4P59240 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
Nphp4P59240 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Nphp4P59240 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Nphp4P59240 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Nphp4P59240 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC17.87■□□□□ 0.45
Nphp4P59240 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Nphp4P59240 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC17.86■□□□□ 0.45
Nphp4P59240 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Nphp4P59240 Ptprs-211ENSMUST00000223859 5588 ntBASIC17.86■□□□□ 0.45
Nphp4P59240 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC17.86■□□□□ 0.45
Nphp4P59240 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Nphp4P59240 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Nphp4P59240 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Nphp4P59240 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Nphp4P59240 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Nphp4P59240 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Nphp4P59240 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC17.86■□□□□ 0.45
Nphp4P59240 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Nphp4P59240 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC17.86■□□□□ 0.45
Nphp4P59240 Gm14921-201ENSMUST00000118643 908 ntBASIC17.86■□□□□ 0.45
Nphp4P59240 Gm15808-201ENSMUST00000119046 604 ntBASIC17.86■□□□□ 0.45
Nphp4P59240 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC17.86■□□□□ 0.45
Nphp4P59240 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC17.86■□□□□ 0.45
Nphp4P59240 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC17.86■□□□□ 0.45
Nphp4P59240 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC17.86■□□□□ 0.45
Nphp4P59240 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Nphp4P59240 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Nphp4P59240 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Nphp4P59240 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Nphp4P59240 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Nphp4P59240 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Nphp4P59240 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Nphp4P59240 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Nphp4P59240 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Nphp4P59240 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Nphp4P59240 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC17.85■□□□□ 0.45
Nphp4P59240 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC17.85■□□□□ 0.45
Nphp4P59240 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Nphp4P59240 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC17.85■□□□□ 0.45
Nphp4P59240 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Nphp4P59240 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Nphp4P59240 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Nphp4P59240 Gm44207-201ENSMUST00000204568 1424 ntBASIC17.85■□□□□ 0.45
Nphp4P59240 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Nphp4P59240 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Nphp4P59240 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Nphp4P59240 Gm19221-201ENSMUST00000221827 1477 ntBASIC17.85■□□□□ 0.45
Nphp4P59240 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Nphp4P59240 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Nphp4P59240 Gm27320-201ENSMUST00000184892 109 ntBASIC17.85■□□□□ 0.45
Nphp4P59240 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC17.85■□□□□ 0.45
Nphp4P59240 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Nphp4P59240 Gm22058-201ENSMUST00000083393 310 ntBASIC17.85■□□□□ 0.45
Nphp4P59240 Mir339-201ENSMUST00000083659 96 ntBASIC17.85■□□□□ 0.45
Nphp4P59240 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC17.85■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms