Protein–RNA interactions for Protein: P58854

Tubgcp3, Gamma-tubulin complex component 3, mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubgcp3P58854 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Tubgcp3P58854 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Tubgcp3P58854 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Tubgcp3P58854 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Tubgcp3P58854 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Tubgcp3P58854 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Tubgcp3P58854 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC13.65□□□□□ -0.22
Tubgcp3P58854 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Tubgcp3P58854 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Tubgcp3P58854 Gm42612-201ENSMUST00000197986 623 ntBASIC13.65□□□□□ -0.22
Tubgcp3P58854 Gm43170-201ENSMUST00000199827 612 ntBASIC13.65□□□□□ -0.22
Tubgcp3P58854 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC13.65□□□□□ -0.22
Tubgcp3P58854 Gm19078-201ENSMUST00000206311 727 ntBASIC13.65□□□□□ -0.22
Tubgcp3P58854 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC13.65□□□□□ -0.22
Tubgcp3P58854 AC124732.1-201ENSMUST00000221551 910 ntBASIC13.65□□□□□ -0.22
Tubgcp3P58854 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Tubgcp3P58854 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Tubgcp3P58854 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC13.65□□□□□ -0.22
Tubgcp3P58854 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Tubgcp3P58854 Gm5161-201ENSMUST00000075243 853 ntBASIC13.65□□□□□ -0.22
Tubgcp3P58854 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC13.65□□□□□ -0.22
Tubgcp3P58854 Gm3365-201ENSMUST00000216296 1480 ntBASIC13.65□□□□□ -0.22
Tubgcp3P58854 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Tubgcp3P58854 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Tubgcp3P58854 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Tubgcp3P58854 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Tubgcp3P58854 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Tubgcp3P58854 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Tubgcp3P58854 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC13.65□□□□□ -0.22
Tubgcp3P58854 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC13.65□□□□□ -0.22
Tubgcp3P58854 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Tubgcp3P58854 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Tubgcp3P58854 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Tubgcp3P58854 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC13.65□□□□□ -0.23
Tubgcp3P58854 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC13.65□□□□□ -0.23
Tubgcp3P58854 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC13.65□□□□□ -0.23
Tubgcp3P58854 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Tubgcp3P58854 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Tubgcp3P58854 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Tubgcp3P58854 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC13.64□□□□□ -0.23
Tubgcp3P58854 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC13.64□□□□□ -0.23
Tubgcp3P58854 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Tubgcp3P58854 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Tubgcp3P58854 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Tubgcp3P58854 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Tubgcp3P58854 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Tubgcp3P58854 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Tubgcp3P58854 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Tubgcp3P58854 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC13.64□□□□□ -0.23
Tubgcp3P58854 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Tubgcp3P58854 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Tubgcp3P58854 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC13.64□□□□□ -0.23
Tubgcp3P58854 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Tubgcp3P58854 Gm13886-201ENSMUST00000117876 1183 ntBASIC13.64□□□□□ -0.23
Tubgcp3P58854 Gm12537-201ENSMUST00000119266 1002 ntBASIC13.64□□□□□ -0.23
Tubgcp3P58854 Gm11524-201ENSMUST00000119349 807 ntBASIC13.64□□□□□ -0.23
Tubgcp3P58854 Gm12070-201ENSMUST00000119551 1002 ntBASIC13.64□□□□□ -0.23
Tubgcp3P58854 Gm12671-201ENSMUST00000119978 1002 ntBASIC13.64□□□□□ -0.23
Tubgcp3P58854 Gm13292-201ENSMUST00000120014 1000 ntBASIC13.64□□□□□ -0.23
Tubgcp3P58854 Gm12403-201ENSMUST00000121384 959 ntBASIC13.64□□□□□ -0.23
Tubgcp3P58854 Gm15376-201ENSMUST00000122258 783 ntBASIC13.64□□□□□ -0.23
Tubgcp3P58854 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC13.64□□□□□ -0.23
Tubgcp3P58854 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Tubgcp3P58854 Gm10359-201ENSMUST00000180167 1002 ntBASIC13.64□□□□□ -0.23
Tubgcp3P58854 Gm12033-201ENSMUST00000180654 1002 ntBASIC13.64□□□□□ -0.23
Tubgcp3P58854 Gm5559-201ENSMUST00000180755 1002 ntBASIC13.64□□□□□ -0.23
Tubgcp3P58854 Gm4335-201ENSMUST00000182581 1004 ntBASIC13.64□□□□□ -0.23
Tubgcp3P58854 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Tubgcp3P58854 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Tubgcp3P58854 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC13.64□□□□□ -0.23
Tubgcp3P58854 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Tubgcp3P58854 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Tubgcp3P58854 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Tubgcp3P58854 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Tubgcp3P58854 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Tubgcp3P58854 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Tubgcp3P58854 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Tubgcp3P58854 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Tubgcp3P58854 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Tubgcp3P58854 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC13.64□□□□□ -0.23
Tubgcp3P58854 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Tubgcp3P58854 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Tubgcp3P58854 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Tubgcp3P58854 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Tubgcp3P58854 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Tubgcp3P58854 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Tubgcp3P58854 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Tubgcp3P58854 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Tubgcp3P58854 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Tubgcp3P58854 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Tubgcp3P58854 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Tubgcp3P58854 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Tubgcp3P58854 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Tubgcp3P58854 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC13.63□□□□□ -0.23
Tubgcp3P58854 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC13.63□□□□□ -0.23
Tubgcp3P58854 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC13.63□□□□□ -0.23
Tubgcp3P58854 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Tubgcp3P58854 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC13.63□□□□□ -0.23
Tubgcp3P58854 Gm26464-201ENSMUST00000157094 305 ntBASIC13.63□□□□□ -0.23
Tubgcp3P58854 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC13.63□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms