Protein–RNA interactions for Protein: P56873

Sssca1, Sjoegren syndrome/scleroderma autoantigen 1 homolog, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sssca1P56873 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Sssca1P56873 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
Sssca1P56873 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
Sssca1P56873 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
Sssca1P56873 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
Sssca1P56873 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Sssca1P56873 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC10.79□□□□□ -0.68
Sssca1P56873 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Sssca1P56873 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Sssca1P56873 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC10.79□□□□□ -0.68
Sssca1P56873 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
Sssca1P56873 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Sssca1P56873 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Sssca1P56873 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
Sssca1P56873 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Sssca1P56873 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Sssca1P56873 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Sssca1P56873 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Sssca1P56873 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Sssca1P56873 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Sssca1P56873 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Sssca1P56873 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Sssca1P56873 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Sssca1P56873 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Sssca1P56873 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Sssca1P56873 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Sssca1P56873 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Sssca1P56873 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Sssca1P56873 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Sssca1P56873 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Sssca1P56873 Gm26616-202ENSMUST00000195676 3107 ntBASIC10.78□□□□□ -0.68
Sssca1P56873 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
Sssca1P56873 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Sssca1P56873 Gm10176-201ENSMUST00000159707 2264 ntBASIC10.78□□□□□ -0.68
Sssca1P56873 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Sssca1P56873 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Sssca1P56873 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Sssca1P56873 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC10.78□□□□□ -0.68
Sssca1P56873 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Sssca1P56873 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Sssca1P56873 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Sssca1P56873 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
Sssca1P56873 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC10.78□□□□□ -0.68
Sssca1P56873 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Sssca1P56873 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Sssca1P56873 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Sssca1P56873 Gm22065-201ENSMUST00000103753 110 ntBASIC10.78□□□□□ -0.68
Sssca1P56873 Gm22066-201ENSMUST00000103761 110 ntBASIC10.78□□□□□ -0.68
Sssca1P56873 Gm24932-201ENSMUST00000103763 110 ntBASIC10.78□□□□□ -0.68
Sssca1P56873 Gm24115-201ENSMUST00000103799 110 ntBASIC10.78□□□□□ -0.68
Sssca1P56873 Gm22190-201ENSMUST00000103827 110 ntBASIC10.78□□□□□ -0.68
Sssca1P56873 Gm22191-201ENSMUST00000103831 110 ntBASIC10.78□□□□□ -0.68
Sssca1P56873 Gm24721-201ENSMUST00000103849 110 ntBASIC10.78□□□□□ -0.68
Sssca1P56873 Gm28018-201ENSMUST00000103869 110 ntBASIC10.78□□□□□ -0.68
Sssca1P56873 Gm26399-201ENSMUST00000103937 110 ntBASIC10.78□□□□□ -0.68
Sssca1P56873 Gm15678-201ENSMUST00000117573 960 ntBASIC10.78□□□□□ -0.68
Sssca1P56873 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Sssca1P56873 Gm15393-201ENSMUST00000120499 219 ntBASIC10.78□□□□□ -0.68
Sssca1P56873 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC10.78□□□□□ -0.68
Sssca1P56873 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Sssca1P56873 Gm25911-201ENSMUST00000157621 56 ntBASIC10.78□□□□□ -0.68
Sssca1P56873 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC10.78□□□□□ -0.68
Sssca1P56873 Gm24420-201ENSMUST00000176676 59 ntBASIC10.78□□□□□ -0.68
Sssca1P56873 Gm25349-201ENSMUST00000177728 110 ntBASIC10.78□□□□□ -0.68
Sssca1P56873 Gm23616-201ENSMUST00000177797 110 ntBASIC10.78□□□□□ -0.68
Sssca1P56873 Gm25871-201ENSMUST00000177816 110 ntBASIC10.78□□□□□ -0.68
Sssca1P56873 Gm24752-201ENSMUST00000178240 110 ntBASIC10.78□□□□□ -0.68
Sssca1P56873 Gm24496-201ENSMUST00000178287 110 ntBASIC10.78□□□□□ -0.68
Sssca1P56873 Gm25649-201ENSMUST00000178476 110 ntBASIC10.78□□□□□ -0.68
Sssca1P56873 Gm25548-201ENSMUST00000178681 110 ntBASIC10.78□□□□□ -0.68
Sssca1P56873 Gm23147-201ENSMUST00000178841 110 ntBASIC10.78□□□□□ -0.68
Sssca1P56873 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Sssca1P56873 Gm26095-201ENSMUST00000179270 110 ntBASIC10.78□□□□□ -0.68
Sssca1P56873 Gm22171-201ENSMUST00000179283 110 ntBASIC10.78□□□□□ -0.68
Sssca1P56873 Gm23936-201ENSMUST00000179354 110 ntBASIC10.78□□□□□ -0.68
Sssca1P56873 Gm22619-201ENSMUST00000179516 110 ntBASIC10.78□□□□□ -0.68
Sssca1P56873 Gm25255-201ENSMUST00000179579 110 ntBASIC10.78□□□□□ -0.68
Sssca1P56873 Gm24755-201ENSMUST00000179691 110 ntBASIC10.78□□□□□ -0.68
Sssca1P56873 Gm26506-201ENSMUST00000179692 110 ntBASIC10.78□□□□□ -0.68
Sssca1P56873 Gm25086-201ENSMUST00000179931 110 ntBASIC10.78□□□□□ -0.68
Sssca1P56873 Gm23243-201ENSMUST00000180047 110 ntBASIC10.78□□□□□ -0.68
Sssca1P56873 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC10.78□□□□□ -0.68
Sssca1P56873 Gm24659-201ENSMUST00000180212 110 ntBASIC10.78□□□□□ -0.68
Sssca1P56873 Gm24169-201ENSMUST00000180244 110 ntBASIC10.78□□□□□ -0.68
Sssca1P56873 Gm23689-201ENSMUST00000180354 110 ntBASIC10.78□□□□□ -0.68
Sssca1P56873 Gm27359-201ENSMUST00000184153 110 ntBASIC10.78□□□□□ -0.68
Sssca1P56873 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
Sssca1P56873 Gm27785-201ENSMUST00000184268 110 ntBASIC10.78□□□□□ -0.68
Sssca1P56873 Gm27466-201ENSMUST00000184396 110 ntBASIC10.78□□□□□ -0.68
Sssca1P56873 Gm27703-201ENSMUST00000184836 110 ntBASIC10.78□□□□□ -0.68
Sssca1P56873 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Sssca1P56873 Gm43474-201ENSMUST00000196415 774 ntBASIC10.78□□□□□ -0.68
Sssca1P56873 Gm44335-201ENSMUST00000196879 141 ntBASIC10.78□□□□□ -0.68
Sssca1P56873 Gm44297-201ENSMUST00000198304 141 ntBASIC10.78□□□□□ -0.68
Sssca1P56873 Gm44346-201ENSMUST00000198851 141 ntBASIC10.78□□□□□ -0.68
Sssca1P56873 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Sssca1P56873 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Sssca1P56873 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
Sssca1P56873 Gm3695-201ENSMUST00000087222 1009 ntBASIC10.78□□□□□ -0.68
Sssca1P56873 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC10.78□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 45.5 ms