Protein–RNA interactions for Protein: P54276

Msh6, DNA mismatch repair protein Msh6, mousemouse

Known RBP Predictions only

Length 1,358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6P54276 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
Msh6P54276 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Msh6P54276 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Msh6P54276 Styxl1-205ENSMUST00000111164 1243 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Msh6P54276 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC16.79■□□□□ 0.28
Msh6P54276 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Msh6P54276 Gm16505-201ENSMUST00000179981 232 ntBASIC16.79■□□□□ 0.28
Msh6P54276 Rps4l-202ENSMUST00000204242 789 ntBASIC16.79■□□□□ 0.28
Msh6P54276 Gm4768-201ENSMUST00000206199 686 ntBASIC16.79■□□□□ 0.28
Msh6P54276 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Msh6P54276 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Msh6P54276 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Msh6P54276 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Msh6P54276 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Msh6P54276 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Msh6P54276 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Msh6P54276 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Msh6P54276 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Msh6P54276 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Msh6P54276 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Msh6P54276 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Msh6P54276 Cryzl1-204ENSMUST00000122254 845 ntTSL 3 BASIC16.78■□□□□ 0.28
Msh6P54276 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Msh6P54276 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Msh6P54276 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Msh6P54276 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Msh6P54276 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Msh6P54276 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Msh6P54276 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Msh6P54276 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Msh6P54276 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Msh6P54276 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Msh6P54276 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Msh6P54276 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Msh6P54276 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Msh6P54276 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Msh6P54276 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Msh6P54276 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Msh6P54276 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Msh6P54276 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Msh6P54276 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC16.77■□□□□ 0.28
Msh6P54276 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Msh6P54276 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC16.77■□□□□ 0.28
Msh6P54276 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC16.77■□□□□ 0.28
Msh6P54276 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Msh6P54276 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Msh6P54276 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC16.77■□□□□ 0.28
Msh6P54276 Gm18584-201ENSMUST00000203098 964 ntBASIC16.77■□□□□ 0.28
Msh6P54276 Gm9445-201ENSMUST00000207454 1285 ntBASIC16.77■□□□□ 0.28
Msh6P54276 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC16.77■□□□□ 0.28
Msh6P54276 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Msh6P54276 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
Msh6P54276 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
Msh6P54276 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Msh6P54276 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Msh6P54276 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
Msh6P54276 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
Msh6P54276 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Msh6P54276 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Msh6P54276 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC16.77■□□□□ 0.28
Msh6P54276 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Msh6P54276 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Msh6P54276 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC16.77■□□□□ 0.27
Msh6P54276 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Msh6P54276 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
Msh6P54276 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC16.77■□□□□ 0.27
Msh6P54276 Gm38049-201ENSMUST00000195698 1372 ntBASIC16.77■□□□□ 0.27
Msh6P54276 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Msh6P54276 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
Msh6P54276 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Msh6P54276 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC16.77■□□□□ 0.27
Msh6P54276 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC16.77■□□□□ 0.27
Msh6P54276 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Msh6P54276 Gm45339-201ENSMUST00000210823 877 ntTSL 5 BASIC16.77■□□□□ 0.27
Msh6P54276 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Msh6P54276 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Msh6P54276 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Msh6P54276 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Msh6P54276 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Msh6P54276 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Msh6P54276 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Msh6P54276 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Msh6P54276 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC16.76■□□□□ 0.27
Msh6P54276 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Msh6P54276 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Msh6P54276 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
Msh6P54276 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Msh6P54276 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Msh6P54276 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Msh6P54276 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Msh6P54276 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Msh6P54276 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Msh6P54276 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Msh6P54276 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Msh6P54276 Snord83b-201ENSMUST00000104546 94 ntBASIC16.76■□□□□ 0.27
Msh6P54276 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC16.76■□□□□ 0.27
Msh6P54276 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Msh6P54276 Wsb2-ps-201ENSMUST00000117937 1217 ntBASIC16.76■□□□□ 0.27
Msh6P54276 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Msh6P54276 Gm5896-201ENSMUST00000189662 1024 ntBASIC16.76■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms