Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Sox3P53784 Gm42690-201ENSMUST00000197921 1836 ntBASIC12.82□□□□□ -0.36
Sox3P53784 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sox3P53784 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Sox3P53784 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Sox3P53784 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sox3P53784 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sox3P53784 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sox3P53784 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sox3P53784 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sox3P53784 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Sox3P53784 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Sox3P53784 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sox3P53784 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sox3P53784 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sox3P53784 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC12.82□□□□□ -0.36
Sox3P53784 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Sox3P53784 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sox3P53784 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC12.82□□□□□ -0.36
Sox3P53784 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sox3P53784 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sox3P53784 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Sox3P53784 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sox3P53784 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sox3P53784 Gm9252-201ENSMUST00000172364 1602 ntBASIC12.81□□□□□ -0.36
Sox3P53784 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sox3P53784 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sox3P53784 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC12.81□□□□□ -0.36
Sox3P53784 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Sox3P53784 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sox3P53784 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Sox3P53784 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC12.81□□□□□ -0.36
Sox3P53784 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Sox3P53784 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC12.81□□□□□ -0.36
Sox3P53784 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC12.81□□□□□ -0.36
Sox3P53784 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Sox3P53784 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sox3P53784 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sox3P53784 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Sox3P53784 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Sox3P53784 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sox3P53784 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sox3P53784 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sox3P53784 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sox3P53784 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sox3P53784 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sox3P53784 Gm15889-202ENSMUST00000212669 2443 ntBASIC12.81□□□□□ -0.36
Sox3P53784 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sox3P53784 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sox3P53784 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Sox3P53784 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sox3P53784 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sox3P53784 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sox3P53784 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sox3P53784 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sox3P53784 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sox3P53784 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sox3P53784 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sox3P53784 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sox3P53784 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Sox3P53784 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sox3P53784 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC12.8□□□□□ -0.36
Sox3P53784 Gm6159-201ENSMUST00000191249 1724 ntBASIC12.8□□□□□ -0.36
Sox3P53784 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sox3P53784 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Sox3P53784 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sox3P53784 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sox3P53784 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sox3P53784 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Sox3P53784 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC12.8□□□□□ -0.36
Sox3P53784 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC12.8□□□□□ -0.36
Sox3P53784 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC12.8□□□□□ -0.36
Sox3P53784 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC12.8□□□□□ -0.36
Sox3P53784 Gm42791-202ENSMUST00000147473 727 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Sox3P53784 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC12.8□□□□□ -0.36
Sox3P53784 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Sox3P53784 Gm4804-201ENSMUST00000182234 999 ntBASIC12.8□□□□□ -0.36
Sox3P53784 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC12.8□□□□□ -0.36
Sox3P53784 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC12.8□□□□□ -0.36
Sox3P53784 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Sox3P53784 Gm45880-201ENSMUST00000213041 853 ntBASIC12.8□□□□□ -0.36
Sox3P53784 AC093022.1-201ENSMUST00000226949 1072 ntBASIC12.8□□□□□ -0.36
Sox3P53784 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sox3P53784 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Sox3P53784 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sox3P53784 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sox3P53784 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sox3P53784 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Sox3P53784 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC12.8□□□□□ -0.36
Sox3P53784 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sox3P53784 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sox3P53784 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Sox3P53784 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sox3P53784 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sox3P53784 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sox3P53784 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Sox3P53784 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sox3P53784 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Sox3P53784 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sox3P53784 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms