Protein–RNA interactions for Protein: P52955

Lbx1, Transcription factor LBX1, mousemouse

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lbx1P52955 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Lbx1P52955 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Lbx1P52955 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Lbx1P52955 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Lbx1P52955 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Lbx1P52955 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Lbx1P52955 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Lbx1P52955 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Lbx1P52955 Gm15897-201ENSMUST00000117770 1486 ntBASIC12.91□□□□□ -0.34
Lbx1P52955 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Lbx1P52955 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC12.91□□□□□ -0.34
Lbx1P52955 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Lbx1P52955 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Lbx1P52955 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC12.9□□□□□ -0.34
Lbx1P52955 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC12.9□□□□□ -0.34
Lbx1P52955 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Lbx1P52955 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Lbx1P52955 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Lbx1P52955 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Lbx1P52955 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Lbx1P52955 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Lbx1P52955 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Lbx1P52955 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Lbx1P52955 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Lbx1P52955 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC12.9□□□□□ -0.34
Lbx1P52955 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Lbx1P52955 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Lbx1P52955 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Lbx1P52955 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Lbx1P52955 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Lbx1P52955 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Lbx1P52955 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Lbx1P52955 Gm1667-201ENSMUST00000151651 558 ntTSL 3 BASIC12.9□□□□□ -0.34
Lbx1P52955 Gm38304-201ENSMUST00000161826 600 ntTSL 3 BASIC12.9□□□□□ -0.34
Lbx1P52955 Gm19353-201ENSMUST00000184561 445 ntBASIC12.9□□□□□ -0.34
Lbx1P52955 Gm8885-201ENSMUST00000189382 598 ntBASIC12.9□□□□□ -0.34
Lbx1P52955 Cd1d2-202ENSMUST00000192481 1131 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Lbx1P52955 Gm43916-201ENSMUST00000205062 967 ntBASIC12.9□□□□□ -0.34
Lbx1P52955 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC12.9□□□□□ -0.34
Lbx1P52955 Gm44651-201ENSMUST00000207343 372 ntBASIC12.9□□□□□ -0.34
Lbx1P52955 Gm8913-201ENSMUST00000209491 641 ntBASIC12.9□□□□□ -0.34
Lbx1P52955 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Lbx1P52955 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Lbx1P52955 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Lbx1P52955 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Lbx1P52955 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Lbx1P52955 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Lbx1P52955 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC12.9□□□□□ -0.34
Lbx1P52955 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Lbx1P52955 Gm10040-201ENSMUST00000080726 1662 ntBASIC12.89□□□□□ -0.35
Lbx1P52955 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Lbx1P52955 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Lbx1P52955 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Lbx1P52955 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Lbx1P52955 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Lbx1P52955 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Lbx1P52955 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Lbx1P52955 Gm4755-201ENSMUST00000181803 2647 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Lbx1P52955 Rs1-202ENSMUST00000112368 731 ntTSL 3 BASIC12.89□□□□□ -0.35
Lbx1P52955 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC12.89□□□□□ -0.35
Lbx1P52955 Gm24749-201ENSMUST00000157838 343 ntBASIC12.89□□□□□ -0.35
Lbx1P52955 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Lbx1P52955 Crnde-207ENSMUST00000180102 732 ntTSL 3 BASIC12.89□□□□□ -0.35
Lbx1P52955 Gm2546-201ENSMUST00000182630 991 ntBASIC12.89□□□□□ -0.35
Lbx1P52955 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC12.89□□□□□ -0.35
Lbx1P52955 Mir124-2hg-207ENSMUST00000189868 535 ntTSL 2 BASIC12.89□□□□□ -0.35
Lbx1P52955 Gm7003-201ENSMUST00000195089 312 ntBASIC12.89□□□□□ -0.35
Lbx1P52955 Gm4768-201ENSMUST00000206199 686 ntBASIC12.89□□□□□ -0.35
Lbx1P52955 Gm45338-201ENSMUST00000209198 820 ntTSL 5 BASIC12.89□□□□□ -0.35
Lbx1P52955 CT010486.3-201ENSMUST00000224555 811 ntBASIC12.89□□□□□ -0.35
Lbx1P52955 Phxr2-201ENSMUST00000060761 1159 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Lbx1P52955 Nat8f6-201ENSMUST00000087656 925 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Lbx1P52955 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Lbx1P52955 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC12.89□□□□□ -0.35
Lbx1P52955 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Lbx1P52955 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Lbx1P52955 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Lbx1P52955 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Lbx1P52955 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Lbx1P52955 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Lbx1P52955 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Lbx1P52955 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC12.88□□□□□ -0.35
Lbx1P52955 Sorbs3-204ENSMUST00000227929 2460 ntBASIC12.88□□□□□ -0.35
Lbx1P52955 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Lbx1P52955 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Lbx1P52955 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Lbx1P52955 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Lbx1P52955 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Lbx1P52955 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Lbx1P52955 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Lbx1P52955 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Lbx1P52955 Rffl-205ENSMUST00000103218 1264 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Lbx1P52955 Ttc4-202ENSMUST00000106772 935 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Lbx1P52955 Gm14350-201ENSMUST00000116642 640 ntBASIC12.88□□□□□ -0.35
Lbx1P52955 Pcnp-203ENSMUST00000119981 901 ntTSL 3 BASIC12.88□□□□□ -0.35
Lbx1P52955 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
Lbx1P52955 Gm12502-201ENSMUST00000120197 444 ntBASIC12.88□□□□□ -0.35
Lbx1P52955 Churc1-203ENSMUST00000126408 462 ntTSL 2 BASIC12.88□□□□□ -0.35
Lbx1P52955 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC12.88□□□□□ -0.35
Lbx1P52955 5730437C11Rik-201ENSMUST00000155540 242 ntTSL 5 BASIC12.88□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 53.8 ms