Protein–RNA interactions for Protein: P52946

Pdx1, Pancreas/duodenum homeobox protein 1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdx1P52946 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Pdx1P52946 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Pdx1P52946 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Pdx1P52946 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Pdx1P52946 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Pdx1P52946 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Pdx1P52946 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC13.21□□□□□ -0.3
Pdx1P52946 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC13.21□□□□□ -0.3
Pdx1P52946 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Pdx1P52946 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Pdx1P52946 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.3
Pdx1P52946 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pdx1P52946 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pdx1P52946 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Pdx1P52946 Gm9755-201ENSMUST00000032981 1356 ntBASIC13.2□□□□□ -0.3
Pdx1P52946 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pdx1P52946 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pdx1P52946 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Pdx1P52946 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pdx1P52946 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pdx1P52946 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Pdx1P52946 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pdx1P52946 Ntrk2-209ENSMUST00000225950 2640 ntBASIC13.2□□□□□ -0.3
Pdx1P52946 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC13.2□□□□□ -0.3
Pdx1P52946 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pdx1P52946 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pdx1P52946 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC13.2□□□□□ -0.3
Pdx1P52946 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pdx1P52946 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pdx1P52946 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Pdx1P52946 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC13.2□□□□□ -0.3
Pdx1P52946 Gm8463-201ENSMUST00000208573 613 ntBASIC13.2□□□□□ -0.3
Pdx1P52946 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC13.2□□□□□ -0.3
Pdx1P52946 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC13.2□□□□□ -0.3
Pdx1P52946 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pdx1P52946 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pdx1P52946 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pdx1P52946 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pdx1P52946 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Pdx1P52946 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC13.2□□□□□ -0.3
Pdx1P52946 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Pdx1P52946 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pdx1P52946 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC13.2□□□□□ -0.3
Pdx1P52946 AL645783.1-201ENSMUST00000221416 1832 ntBASIC13.2□□□□□ -0.3
Pdx1P52946 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pdx1P52946 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pdx1P52946 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Pdx1P52946 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pdx1P52946 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pdx1P52946 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pdx1P52946 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Pdx1P52946 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Pdx1P52946 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pdx1P52946 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pdx1P52946 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pdx1P52946 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Pdx1P52946 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pdx1P52946 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pdx1P52946 Gm38346-201ENSMUST00000192379 2639 ntBASIC13.19□□□□□ -0.3
Pdx1P52946 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pdx1P52946 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pdx1P52946 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pdx1P52946 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pdx1P52946 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pdx1P52946 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pdx1P52946 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC13.19□□□□□ -0.3
Pdx1P52946 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pdx1P52946 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pdx1P52946 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pdx1P52946 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC13.19□□□□□ -0.3
Pdx1P52946 Gm12928-201ENSMUST00000117115 573 ntBASIC13.19□□□□□ -0.3
Pdx1P52946 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC13.19□□□□□ -0.3
Pdx1P52946 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC13.19□□□□□ -0.3
Pdx1P52946 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC13.19□□□□□ -0.3
Pdx1P52946 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Pdx1P52946 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC13.19□□□□□ -0.3
Pdx1P52946 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC13.19□□□□□ -0.3
Pdx1P52946 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC13.19□□□□□ -0.3
Pdx1P52946 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pdx1P52946 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pdx1P52946 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pdx1P52946 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Pdx1P52946 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Pdx1P52946 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pdx1P52946 Gm9924-202ENSMUST00000192760 2311 ntBASIC13.19□□□□□ -0.3
Pdx1P52946 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pdx1P52946 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC13.19□□□□□ -0.3
Pdx1P52946 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Pdx1P52946 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pdx1P52946 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pdx1P52946 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pdx1P52946 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pdx1P52946 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Pdx1P52946 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Pdx1P52946 Gm6198-201ENSMUST00000191337 2929 ntBASIC13.19□□□□□ -0.3
Pdx1P52946 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Pdx1P52946 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pdx1P52946 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pdx1P52946 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Pdx1P52946 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms